Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0988 ATGCAGTCTAGTCCTTTGCTTCTTGAGGAGCCTATCAGGATGGCTTCCATCCTTGAGCCATCCAAACCTACTTTCTTTCCAGCCACGACAAAAATTGTTGGCACACTTGGTCCAAAGTCACGATCTGTTGATGTAATTTCCCGTTGCCTTGATGCAGGAATGTCAGTGGCAAGGTTTGACTTCTCATGGGGTGATCCAGAATACCACCAAGAGACAATAGAAAATTTAAAGGCTGCTATCAAAAGTACCAAGAAACTCTGCGCGGTTATGTTAGACACTGTGGGACCAGAATTACAAGTTGTTAATAAAACTGATCGTCCAATTGACCTTGAAGAGGGCACACTAATTGTCTTAACTCCAGATCAAAACAAAGAAGCTACTTCAAATCTACTGCCAGTAAATTTTAGTGGGCTATCAAAGGCTGTGAAGAAGGGTGATACTATTTTTATTGGTAAATACCTGTTTACAGGAAGCGAAACAACTTCTGTATGGCTGGAGGTTAGTAAGGTGGATGGTGATGATGTCACTTGTCTAATAAAAAACTCAGCTACACTTACCGGATCATTGTATACTATACATGTCTCTCAGATTCGTATTGATCTTCCTACTCTTACTGAAAAGGATAAGGAGGTAATAAGCACATGGGGTGTTCGAAACAATATCGACTTCCTCTCATTATATACCCGACACGCTGAAGATGTTCGCCATGCCCGTGAATTTCTCTCTAAGCATGGTGACCTCAAGCAGACACATATTTTTGCAAAGATTGAAAATGTCGAGGGATTGAAACATTTTGATGAGATTCTGAGGGAAGCAGACGGTGTCATCCTCTCTCGTGGAAATTTAGGGATAGATCTCCCACCTGAGAAGGTGTTTTTATTCCAAAAAGCTGCTATTTACAAGTGTAACATGGCTGGGAAGCCAGTAGTTGTCACACGTGTCGTGGATTCTATGACTGATAATCTGAGACCTACTCGTGCTGAAGCAACTGACGTTGCCAATGCCGTTTTGGATGGCAGTGATGCAATTCTCCTTGGGGCAGAGACCCTAAGGGGCTTATACCCTGTAGAAACCATTTCTATAGTGGGAAAAATTTGTGCTGAGGCAGAGAAAGTTTATAATCACGATTGGCATTTTAAGAAGACTGTCAAACATGTGGGAGAGCCAATGAGCCACTTAGAATCAATTGCTTCCTCTGCGGTTCGAGCGGCCATTAAGGTTAAGGCCTCTGTTATTATTTGCTTCACTTCATCTGGAAGAGCTGCAAGGTTGATTGCTAAGTACAGACCAACCATGCCTGTGATATCTGTTGTCATTCCTCAATTAAAAACAAATCAACTCAGATGGACATTCACCGGCGCTTTTGAGGCTAGGCAATCACTGATTGTGAGAGGTCTTTTCCCTATGCTGGCAGATCCTAGACACCCGGCTGAGTCAAATACTGGAACAAATGAATCAATTTTGAAGGTTGCTTTAGACCATGGCAAGGCTTTTGGTGTCATAAAGTCACATGACCGTGTTGTTGTCTGCCAGAAAGTTGGTGACTCATCAGTTGTCAAGATTATTGAGCTTGAAGACTAG 1581 0.425 MQSSPLLLEEPIRMASILEPSKPTFFPATTKIVGTLGPKSRSVDVISRCLDAGMSVARFDFSWGDPEYHQETIENLKAAIKSTKKLCAVMLDTVGPELQVVNKTDRPIDLEEGTLIVLTPDQNKEATSNLLPVNFSGLSKAVKKGDTIFIGKYLFTGSETTSVWLEVSKVDGDDVTCLIKNSATLTGSLYTIHVSQIRIDLPTLTEKDKEVISTWGVRNNIDFLSLYTRHAEDVRHAREFLSKHGDLKQTHIFAKIENVEGLKHFDEILREADGVILSRGNLGIDLPPEKVFLFQKAAIYKCNMAGKPVVVTRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEKVYNHDWHFKKTVKHVGEPMSHLESIASSAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVISVVIPQLKTNQLRWTFTGAFEARQSLIVRGLFPMLADPRHPAESNTGTNESILKVALDHGKAFGVIKSHDRVVVCQKVGDSSVVKIIELED* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0988 526 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 8 375 IPR015813 GO:0003824
Lja5g0988 526 Pfam Pyruvate kinase, alpha/beta domain 394 518 IPR015795 -
Lja5g0988 526 SUPERFAMILY PK C-terminal domain-like 357 521 IPR036918 -
Lja5g0988 526 Gene3D - 96 202 IPR015806 GO:0004743|GO:0006096
Lja5g0988 526 Pfam Pyruvate kinase, barrel domain 29 375 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lja5g0988 526 TIGRFAM pyruv_kin: pyruvate kinase 29 515 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lja5g0988 526 PRINTS Pyruvate kinase family signature 252 278 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lja5g0988 526 PRINTS Pyruvate kinase family signature 279 303 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lja5g0988 526 PRINTS Pyruvate kinase family signature 347 363 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lja5g0988 526 PRINTS Pyruvate kinase family signature 328 346 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lja5g0988 526 PRINTS Pyruvate kinase family signature 85 101 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lja5g0988 526 PANTHER PYRUVATE KINASE 4 526 - -
Lja5g0988 526 PANTHER PYRUVATE KINASE 4 526 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lja5g0988 526 Gene3D - 30 369 IPR040442 -
Lja5g0988 526 SUPERFAMILY PK beta-barrel domain-like 96 187 IPR011037 -
Lja5g0988 526 Gene3D - 370 512 IPR036918 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0988 Lja-Chr5 9714677 9722915 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0988 K00873 - gmx:100799747 949.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0988 5 9714677 9722915 Lja1g0757 1 7360271 7367165 ECH
Lja5g0988 5 9714677 9722915 Lja5g0988 5 9714677 9722915 ECH