Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0757 ATGCATTCCAGTCACATCCTTCTCGAGGAACCCATTCGCATGGTTTCAATCCTTGACCCATCCAAACCCAGCTTTTTCCCTGCTATGACAAAGATCGTTGGTACTCTGGGTCCTCAATCTCGCTCAGTCGAGGTTATTTCTCAATGTCTTCAAGCAGGAATGTCTGTGGCGCGTTTCGACTTTTCTTGGGGTGACCCTGAATATCACCAGGAGACTTTGGACAATTTGAAGACTGCTATTAAGACTACTAAGAAGCTCTGTGCTGTTATGTTGGACACTGTTGGTGCAGAGATGCAGGTTGTTAACAAAAGTGAGAAGTCCATCTCGCTTGAGGTTGATGGTCAGGTTGTTTTGACTCCTGACCAGGGACATGAAGCTTCTTCGGAAGTACTGCCTATCAATTTTGATGGACTAGCTAAGTCTGTGAAAAAGGGAGATACCATTTTCGTCGGTCATTACTTGTTCACAGGAAGTGAAACTACGTCTGTATGGCTAGAGGTAGCTGAAGTTAGAGGGCTGGATGTTGTTTGTACCATAAAGAACTCAGCAACATTGGCTGGGTCATTGTTCACATTACATGCCTCTCAAGTTCATATTGACTTGCCTACCCTCACTGAGAAAGACAAGGAGGTTATAAGCACCTGGGGGGTGAAAAACAAAATTGATTTTCTCTCATTGTCATATACCAGGCATGCTGAAGATGTTCGCGAGGCACGTCAATTCCTTTCTAAATTAGGTGATGTTAGTCAGACTCAAATTTTTGCGAAAATTGAAAATGTTGAGGGTTTGACCCATTTTGATGAGATCCTACAAGAAGCAGATGGTATTATACTTTCTCGTGGGAATTTGGGCATTGATCTTCCACCCGAGAAGGTATTTTTATTTCAGAAGTCTGCCCTTTACAAGTGTAATATGGCTGGGAAACCTGCTGTGCTTACACGTGTTGTGGATAGCATGACTGGCAACTTAAGACCAACTCGTGCAGAAGCCACTGATGTTGCTAATGCTGTTTTAGATGGAAGTGATGCAATACTTCTAGGTGCTGAGACTTTACGTGGGTTTTATCCTGTTCAGACCATTTCTACTGTTGGCAAAATTTGTTCTGAAGCTGAGAAAGTTTACAATCAAGACCTTTATTTTAAAAAGACAGTCAAATATGTTGGAGAACCAATGACCCACTTGGAATCTATTGCGTCCTCTGCGGTACGAGCAGCTATTAAGGTGAAAGCTTCTGTTATCATTTGCTTCACTTCATCTGGAAGGGCTGCAAGATTGATAGCAAAGTACAGACCAACAATGCCTGTTCTCTCTGTTGTGATCCCTCAACTTAAGACAAATCAGCTAAAATGGAGCTTTAGTGGAGCTTTTGAGGACCAACTACCAACTGATTTGTGGGAATGCTTGTTTACAACTACTGCAAGACAATCACTTATTGTAAGAGGTCTCTTTCCTATGCTTGCTGATCCCCGACATCCTGCCGAGTCAACAAGTGCCACAAATGAGTCTATTCTGAAGGTAGCCCTTGATTATGGAAAAGCATCAGGAGTTATAAAGTCACATGATCGAGTGGTTGTTTGCCAGAAAGTTGGTGATGCATCTGTGGTAAAGATTATCGAGCTTGAAGATTAA 1629 0.4248 MHSSHILLEEPIRMVSILDPSKPSFFPAMTKIVGTLGPQSRSVEVISQCLQAGMSVARFDFSWGDPEYHQETLDNLKTAIKTTKKLCAVMLDTVGAEMQVVNKSEKSISLEVDGQVVLTPDQGHEASSEVLPINFDGLAKSVKKGDTIFVGHYLFTGSETTSVWLEVAEVRGLDVVCTIKNSATLAGSLFTLHASQVHIDLPTLTEKDKEVISTWGVKNKIDFLSLSYTRHAEDVREARQFLSKLGDVSQTQIFAKIENVEGLTHFDEILQEADGIILSRGNLGIDLPPEKVFLFQKSALYKCNMAGKPAVLTRVVDSMTGNLRPTRAEATDVANAVLDGSDAILLGAETLRGFYPVQTISTVGKICSEAEKVYNQDLYFKKTVKYVGEPMTHLESIASSAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVLSVVIPQLKTNQLKWSFSGAFEDQLPTDLWECLFTTTARQSLIVRGLFPMLADPRHPAESTSATNESILKVALDYGKASGVIKSHDRVVVCQKVGDASVVKIIELED* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0757 542 Gene3D - 30 370 IPR040442 -
Lja1g0757 542 TIGRFAM pyruv_kin: pyruvate kinase 30 441 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lja1g0757 542 Pfam Pyruvate kinase, alpha/beta domain 395 537 IPR015795 -
Lja1g0757 542 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 5 376 IPR015813 GO:0003824
Lja1g0757 542 PANTHER PYRUVATE KINASE 2 542 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lja1g0757 542 Pfam Pyruvate kinase, barrel domain 30 374 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lja1g0757 542 Gene3D - 371 528 IPR036918 -
Lja1g0757 542 PANTHER PYRUVATE KINASE 2 542 - -
Lja1g0757 542 SUPERFAMILY PK C-terminal domain-like 389 529 IPR036918 -
Lja1g0757 542 PRINTS Pyruvate kinase family signature 348 364 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lja1g0757 542 PRINTS Pyruvate kinase family signature 85 101 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lja1g0757 542 PRINTS Pyruvate kinase family signature 253 279 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lja1g0757 542 PRINTS Pyruvate kinase family signature 221 235 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lja1g0757 542 PRINTS Pyruvate kinase family signature 280 304 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lja1g0757 542 PRINTS Pyruvate kinase family signature 329 347 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lja1g0757 542 SUPERFAMILY PK beta-barrel domain-like 103 186 IPR011037 -
Lja1g0757 542 Gene3D - 96 202 IPR015806 GO:0004743|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0757 Lja-Chr1 7360271 7367165 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0757 K00873 - gmx:100781158 991.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0757 1 7360271 7367165 Lja1g0757 1 7360271 7367165 ECH
Lja5g0988 5 9714677 9722915 Lja1g0757 1 7360271 7367165 ECH
Lja1g0757 1 7360271 7367165 Lja5g2551 5 50122622 50130172 PCT