Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0746 ATGTCTGTGACATCTTCATACCCATGCATCAAAATCCCAGCATGTTCCACTTCTTCATCATGCTCATCATCATCAACTTCCTCCTATAACTCTTTCAGATTCTCTTCCTGCAAGCCTTATGCTGTTGTTGTTACTATAAGGAATTCTCAGACTGAAGGGCCTATAAGAAGACCAGTGGTCAGAGAACCATCATCAAGTGTTCCTCAGCTGCAGAAGCCATCACCTCCTTCTCAGCCTCCGCCGCAAGCCACGGTTGCGCCGCCGCCAGAGCAGAAGGCGGGTTCTGCTGCTGTTGGATATGATAAGAATGCTGTGACTACAATAGAGTTTCAGAGGCAAAAGGCTAAGGAGTTGCAGGAATATTTTAAGCAGAAGAAGCTTGAAGAGGCTAGTCAGGGTCCTGCCTTTGGCTTCGTTGGGAAAAATGAGATTGGGAATGGAAGATGGGCAATGTTTGGTTTTGCTGTTGGGATGCTAACAGAGTATGCAACTGGCTCTGACTTTGTTGATCAAGTCAAGATCCTTCTCTCGAATTTTGGGATAGTAGATTTGGAATGA 558 0.457 MSVTSSYPCIKIPACSTSSSCSSSSTSSYNSFRFSSCKPYAVVVTIRNSQTEGPIRRPVVREPSSSVPQLQKPSPPSQPPPQATVAPPPEQKAGSAAVGYDKNAVTTIEFQRQKAKELQEYFKQKKLEEASQGPAFGFVGKNEIGNGRWAMFGFAVGMLTEYATGSDFVDQVKILLSNFGIVDLE* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0746 185 MobiDBLite consensus disorder prediction 53 98 - -
Lja5g0746 185 PANTHER MYB-LIKE PROTEIN U 1 184 - -
Lja5g0746 185 MobiDBLite consensus disorder prediction 69 87 - -
Lja5g0746 185 PANTHER UPF0041 BRAIN PROTEIN 44-RELATED 1 184 - -
Lja5g0746 185 Gene3D Chlorophyll a/b binding protein domain 81 178 - -
Lja5g0746 185 SUPERFAMILY Chlorophyll a-b binding protein 131 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0746 Lja-Chr5 6857905 6860550 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0746 - - gmx:100802195 212.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0746 5 6857905 6860550 Lja5g0746 5 6857905 6860550 ECH
Lja2g2800 2 43386772 43389691 Lja5g0746 5 6857905 6860550 PCT