Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2800 ATGTCTCTGACGTCTTCAATCCCATGCATCAAAATCCCAACATTTTCCTCAACTCCATCCACATCATCCTATTCTTTTAGGTTCTCTTCGCACAAGACTATCACTATAAGAAATTCTCAAGCTGAAGGGCCACTGAGAAGACCAGTGACTCCCTCACTCAGGGAACCACCATCATCTAGTGCCCCTCCGCCATCCCCTACAGTAGTGCCTCCCCCACAGAAGCCAGGTGCTGTTGTTGTTGGGGATGACAAGAATGTTGTCTCATTAGAATTTCAGAGGAAGAAGGCTAAGGAGTTGCAGGAATACTTCAAGCAGAAGAAGCTTGAAGAAGCAAATCAAGGCCCTTTGTTTGGTTTCATTGGGAAAAATGAGACTGGCAATGGAAGATGGGCAATGTTCGGTTTTGCTGTTGGGTTGCTGACAGAGTATGCAACAGGCTCAGACTTTGTTGATCAAGTAAAGATCCTTCTCTCAAATTTTGGGATAATAGATTTGGAATGA 501 0.4451 MSLTSSIPCIKIPTFSSTPSTSSYSFRFSSHKTITIRNSQAEGPLRRPVTPSLREPPSSSAPPPSPTVVPPPQKPGAVVVGDDKNVVSLEFQRKKAKELQEYFKQKKLEEANQGPLFGFIGKNETGNGRWAMFGFAVGLLTEYATGSDFVDQVKILLSNFGIIDLE* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2800 166 PANTHER UPF0041 BRAIN PROTEIN 44-RELATED 1 165 - -
Lja2g2800 166 PANTHER ACROSIN-LIKE 1 165 - -
Lja2g2800 166 MobiDBLite consensus disorder prediction 55 73 - -
Lja2g2800 166 SUPERFAMILY Chlorophyll a-b binding protein 114 155 - -
Lja2g2800 166 MobiDBLite consensus disorder prediction 35 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2800 Lja-Chr2 43386772 43389691 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2800 - - jre:109011391 212.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2800 2 43386772 43389691 Lja2g2800 2 43386772 43389691 ECH
Lja2g2800 2 43386772 43389691 Lja5g0746 5 6857905 6860550 PCT