Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0738 ATGGCAGCAGCAAAGCGCGTGTACCAAGTTTGGAAAGGAAGTAATAAATTCATATGTGGAGGGAGGTTGGTATTTGGGCCTGATGCTAGGTCCCTGCTTATCACCTTGTTGCTGATTTTGGTTCCAGTTATCATCTTTTGTGTATGTGTAGCAAGGCATCTTCGGCATGAATTTTCTTCAGATTATTCAGGATATGCTATTTTAGTAGTGGCAATTCTGTTTACTATTCTTGTCCTGTTGCTTCTCTTTCTTACTTCCTCTCGTGATCCGGGTATCATTCCAAGAAATTTACATCCACCAGAAGAAGAGTTCCGTTATGATTCTTCTGCTGATGCTGGGGGAGCACGACAAACACCTAGCCTTCAGTTCCCTCGAACAAAAGAAGTGATTGTCAATGGTCTTGTTGTAAAGGTGAAATACTGTGACACTTGTATGCTGTATCGTCCTCCTCGTTGCTCACATTGCTCCATTTGCGACAACTGTGTTGAGCGTTTCGATCACCACTGCCCTTGGGTGGGCCAATGCATTGGACTGAGAAACTACCGTTACTTCTTTCTGTTTGTTTCTTCAGCAACTATTTTGTGCATCTATGTCTTTTCCTTCTCAGCTTTTTACATCAAGGTTCTGATGGATAATAATGACAGTACCGTGTGGAAGGCGATAAGAAAATCTCCTGCATCTGTGATACTAATGGCTTATTCTTTCATCTCTCTGTGGTTTGTTGGTGGACTAACTGGTTTTCATTTATACCTTATAGGCACAAATCAGACAACCTATGAAAACTTCCGGTACAGAGCTGATGGCAGGATCAATGTTTTCAACCGAGGTTGTTTAAATAATTTTCTTGAAGTGTTCTGCACAAAAGTAAAGCCCTCAAGGAACAAATTCAGGGCTTTTGTCCAAGAGGAGGTACAAAGGCCAATGGCTCCGGTCAATGACCGGCAGCGTGTTTCAGATGACTTGGGTGGAGATCGCCGTCCTAAGGTTGAAGATGATCTAGATATTGGTGAAGACCTATTGAAGATATCGCAGCGTAGGAATATCGAAGAACTCGATGAGGACATTCGGAGCAGAGGGAGCAACGGACAGCCCCATAATACATCTGAACCTGACTCAATTTTGTCGTCAGATCGTCGAGCTCAAACAATTCGATCCGATAATAGGCACTCAAGTTGGGAAAGGAGGAGTGCAAGCTGGGAAATTGATCAAGATGTTCTTGCCAATTCAAATGTCACTGAAAGCAGAAACTATGTTACATCAAAGGAAATGCGCCAATGA 1278 0.4288 MAAAKRVYQVWKGSNKFICGGRLVFGPDARSLLITLLLILVPVIIFCVCVARHLRHEFSSDYSGYAILVVAILFTILVLLLLFLTSSRDPGIIPRNLHPPEEEFRYDSSADAGGARQTPSLQFPRTKEVIVNGLVVKVKYCDTCMLYRPPRCSHCSICDNCVERFDHHCPWVGQCIGLRNYRYFFLFVSSATILCIYVFSFSAFYIKVLMDNNDSTVWKAIRKSPASVILMAYSFISLWFVGGLTGFHLYLIGTNQTTYENFRYRADGRINVFNRGCLNNFLEVFCTKVKPSRNKFRAFVQEEVQRPMAPVNDRQRVSDDLGGDRRPKVEDDLDIGEDLLKISQRRNIEELDEDIRSRGSNGQPHNTSEPDSILSSDRRAQTIRSDNRHSSWERRSASWEIDQDVLANSNVTESRNYVTSKEMRQ* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0738 425 MobiDBLite consensus disorder prediction 360 380 - -
Lja5g0738 425 MobiDBLite consensus disorder prediction 310 330 - -
Lja5g0738 425 Pfam DHHC palmitoyltransferase 139 263 IPR001594 GO:0016409
Lja5g0738 425 MobiDBLite consensus disorder prediction 353 396 - -
Lja5g0738 425 ProSiteProfiles DHHC domain profile. 139 189 - -
Lja5g0738 425 MobiDBLite consensus disorder prediction 381 396 - -
Lja5g0738 425 PANTHER S-ACYLTRANSFERASE 7 424 - -
Lja5g0738 425 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 7 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0738 Lja-Chr5 6793020 6798216 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0738 66 334 Lipid Metabolism Gene Families AT4G22750 27.622 2.96e-16 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0738 K16675 - gmx:100820208 707.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0738 5 6793020 6798216 Lja5g0738 5 6793020 6798216 ECH
Lja2g2792 2 42918116 42927128 Lja5g0738 5 6793020 6798216 PCT