Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2792 ATGGCAGCGAAGCGTGTGTACGAGGCATGGAAAGGAAGTAACAAATTCCTATTCGGAGGAAGGTTGATATTTGGGCCTGACGTGAAATCGCTGCTTTTAACCTTGTTCCTGATTATTGCTCCGGTTATCGTCTTTTGTGTATTTGTAGCAAGGCATCTTCGGCATGAGTTTTCGTCGTATAATGCAGGATATGCTATTTTGGTGGTGGCAGTTCTCTTTAATATTTTTGAGGAAGATGATTCCTATCAGCAAATGTATGCATTGATGGTGCTGGTACTTCTCTTCCGTACTTCTTCGCGTGATCCGGGCATTATTCCGAGGAATTTACATCCACCAGAGGAAGAGTTCCGTTATGACTCTTCAGTTTCTGCTGATCCCGGGGGACGACAAACACCAAGCCTCCAGTTCCCTCGAACAAAAGATGTAATGGTCAATGGCCTTCCTGTAAGGATAAAGTATTGTGAGACATGTATGTTGTATCGTCCTCCTCGTTGCTCACATTGCTCCATTTGCAACAATTGTGTTGAACGTTTTGATCATCATTGCCCTTGGGTGGGCCAATGCATTGGACTGAGGAACTACCGTTACTTCTTTCTGTTTGTTTCTTCAGCAACTATTCTTTGTATCTATGTGTTTTCTTTCTCCGCCTTTTACATCAAGGTTCTGATGGATCATAATCATCCGACAGTTTGGAAGGCATTCAAAGCATCCCCTGCATCTGTTGTACTAATGGCATATAGTTTCATCTCTTTGTGGTTTGTCGGGGGACTCACTGGCTTTCATTTGTACCTCATTGCCTCAAATCAGACTACCTATGAAAACTTCCGTTACAGATCTGACCGCCGGATCAATGTTCATAACCAAGGTTGCTTAAATAATTTTCTGGAAGTTTTTTGTACAAAAGTGAATCCTTCGAAAAACAATTTCCGGGCTTTAGTTCAAGAGGAGATGCAGAGGCAACCCCCTCCCGTCACTGCCCGGGAATCTGAACCAGATTTGGGTGGAGATCCTCGTTCTAAGGTTGAAGATGATCTAGATATTGGTGAAGACCTGTTAAGGATATCACAGCGTCGGAATATTGAAGACATTAGTGAAGACATTCGCAGTAGAGGTAGCAATGGACCTTCCCTTAATACATCTGAAATTGCATCTGTTCTTGGCTCAGATCGTCGAGCTCCAAGCATTCGAGCAGAAGCAAGGCGCTCGAGTTGGGGAAGAAGCGGAAGCTGGGAAATTGCACCAGAGGTCAATACCAGTTCTAATGTAACTGAAACTAGAAGCCATGTTGCTTCAAAGTAA 1299 0.4365 MAAKRVYEAWKGSNKFLFGGRLIFGPDVKSLLLTLFLIIAPVIVFCVFVARHLRHEFSSYNAGYAILVVAVLFNIFEEDDSYQQMYALMVLVLLFRTSSRDPGIIPRNLHPPEEEFRYDSSVSADPGGRQTPSLQFPRTKDVMVNGLPVRIKYCETCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGLRNYRYFFLFVSSATILCIYVFSFSAFYIKVLMDHNHPTVWKAFKASPASVVLMAYSFISLWFVGGLTGFHLYLIASNQTTYENFRYRSDRRINVHNQGCLNNFLEVFCTKVNPSKNNFRALVQEEMQRQPPPVTARESEPDLGGDPRSKVEDDLDIGEDLLRISQRRNIEDISEDIRSRGSNGPSLNTSEIASVLGSDRRAPSIRAEARRSSWGRSGSWEIAPEVNTSSNVTETRSHVASK* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2792 432 MobiDBLite consensus disorder prediction 316 346 - -
Lja2g2792 432 ProSiteProfiles DHHC domain profile. 152 202 - -
Lja2g2792 432 PANTHER S-ACYLTRANSFERASE 6 432 - -
Lja2g2792 432 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 6 432 - -
Lja2g2792 432 MobiDBLite consensus disorder prediction 365 432 - -
Lja2g2792 432 MobiDBLite consensus disorder prediction 331 346 - -
Lja2g2792 432 MobiDBLite consensus disorder prediction 369 385 - -
Lja2g2792 432 MobiDBLite consensus disorder prediction 412 432 - -
Lja2g2792 432 Pfam DHHC palmitoyltransferase 151 276 IPR001594 GO:0016409
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2792 Lja-Chr2 42918116 42927128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2792 116 331 Lipid Metabolism Gene Families AT4G22750 28.916 9.90e-16 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2792 K16675 - gmx:100818705 714.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2792 2 42918116 42927128 Lja2g2792 2 42918116 42927128 ECH
Lja2g2792 2 42918116 42927128 Lja5g0738 5 6793020 6798216 PCT