Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0737 ATGAAATCCTTATCATCATCATCACTCTGTTCCTTGTTGTTCTTCACCCTCTGCATAACTCTCATTGCTCAAACCGCAAATGCCAAACATGCCTTGATGGGGCAGGTTTGCGGCCAGGCATTGCAGGAAAAGGTGGCCTGCATGAGCATTCTGAGGTCAGACCCAAGAATCTTGCACGCCAAGAACTACCGTCAATTTGCGGAGCTGGTTCTGCAACTGGGTCTGAAGAAAGCCATTGCAGGACAGAATTTTCTCAAGGGAATTGCAGCAGTGAACAAGTCTCCAGCGATTGTGCAGTGTGCCAACTTTGACTATGATGGTGTTGTTGGATCGTTCAAGAGTGCCATTGGGGAGTTGGAGAGTGATGCCCAGACAGCGAGTTATGATGCCAAGGTTGCTGGTGATGGACCTGATACATGTGAGAGAGGTTTGGCTGCTGAGCATATTGTGAATCCTGCTATTTCTGGGCTTAACAGGGAGATATTGTTGTTGTCTAACATTGCTTTTATAGCTACTGACAAACTTGATTGA 531 0.467 MKSLSSSSLCSLLFFTLCITLIAQTANAKHALMGQVCGQALQEKVACMSILRSDPRILHAKNYRQFAELVLQLGLKKAIAGQNFLKGIAAVNKSPAIVQCANFDYDGVVGSFKSAIGELESDAQTASYDAKVAGDGPDTCERGLAAEHIVNPAISGLNREILLLSNIAFIATDKLD* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0737 176 Gene3D Invertase/pectin methylesterase inhibitor family protein 16 175 IPR035513 -
Lja5g0737 176 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 6 175 - -
Lja5g0737 176 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 175 IPR035513 -
Lja5g0737 176 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 175 IPR006501 GO:0004857
Lja5g0737 176 CDD PMEI-Pla_a_1_like 47 173 IPR034088 -
Lja5g0737 176 Pfam Plant invertase/pectin methylesterase inhibitor 34 168 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0737 Lja-Chr5 6785345 6785875 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0737 - - gmx:100305627 166.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0737 5 6785345 6785875 Lja5g0737 5 6785345 6785875 ECH
Lja2g2791 2 42901155 42901679 Lja5g0737 5 6785345 6785875 PCT