Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2791 ATGGATTCATCAGCATTTGCATCCTTCTTATTCACCCTTTCCTTGGTCCTCATTTCTCAGCCAGCATCAGGTGCCAATTTGGTTGAAGATTTGTGCAACCAAGTCGGAGAGGACAGTGCCCGTTGCCTGCAAGTCTTGAAAGCCAACCCGAAGATCGCGTCGGCCAAAAATGACATTCAGCTCTGCAAGTCCGTCCTCGAGACCGGGCTGAAGAAGGCGATCGCTGGGCAAAACTACCTGAAGGAAGTGATGAAGACAAACCCTGTACCAGCAATTACTGAGTGCGCAACCGTCCATTACAACGGCGTTGTTGGGTCATTCAAGAGTTCTTTGGGGGAGATTAAAGAAGATGGCATGACAGCAAACTATGATGCTAAAGTTGCTGGTGATGGACCTGAGACTTGTGATAGAGGCTTGGCTGCAGCAAAGATCAACAACCCTGCTATCACTGCTCTGAATAGTGAGATTTTGTTGCTTAGTAAAATTGCATTTTTTGCCACCAACAAGCTTCCCGACTCAGCTTAA 525 0.4743 MDSSAFASFLFTLSLVLISQPASGANLVEDLCNQVGEDSARCLQVLKANPKIASAKNDIQLCKSVLETGLKKAIAGQNYLKEVMKTNPVPAITECATVHYNGVVGSFKSSLGEIKEDGMTANYDAKVAGDGPETCDRGLAAAKINNPAITALNSEILLLSKIAFFATNKLPDSA* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2791 174 Pfam Plant invertase/pectin methylesterase inhibitor 26 162 IPR006501 GO:0004857
Lja2g2791 174 Gene3D Invertase/pectin methylesterase inhibitor family protein 24 170 IPR035513 -
Lja2g2791 174 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 1 170 - -
Lja2g2791 174 PANTHER PECTINESTERASE INHIBITOR DOMAIN-CONTAINING PROTEIN-RELATED 1 170 - -
Lja2g2791 174 TIGRFAM PME_inhib: pectinesterase inhibitor domain 5 170 IPR006501 GO:0004857
Lja2g2791 174 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 25 170 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2791 Lja-Chr2 42901155 42901679 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2791 - - gmx:102669481 210.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2791 2 42901155 42901679 Lja2g2791 2 42901155 42901679 ECH
Lja2g2791 2 42901155 42901679 Lja5g0737 5 6785345 6785875 PCT