Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0723 ATGGAGGTTGAGTTGGGGCTCAAGATCACAAGAACCAGAGATGATACCACTTCCATTTCTGATTTTCAGTTTGCCAAAGACAGAGCAGGACCTCTGTTCTTGTCCAAAGAAACTGATGCAATGTTCACCCTCACTGCACATCTTAAAGGATATAAGAAAGATAACATTGACATTAGTATTAGTGTAGATGGTACTGAGATTTCAGTTAGTGGGGAGAAGGAAGTGCAGGAAATGCAGATGATACCATTCAAGAAAGAGCTAAAAATCAAAGGGTTCAGAAAGAAGTTCAAAATCCCTGATGGGGTGGTTTTGGATCGGATCAAGGCTAAGTATGACGAAGAAGATGCAGCTTTGACAATTGTGATGCCAAAAATGGAAATGGCAAAAGGAATATCAGGGGATGGACTTGAGGAGGTAAAGGAAGAAGAGGTTGTTAATAAAAGTGTGATACAAGAGGCAGAGCAAAGTGCACCAGAAGAGGTTCCTGATAAGACTGAAGAGGAAACAGCTCCAGTGAAGAAGAGAGGTCCCAAACCTTGGAAACCTTGTCCTCCTTTGTATCTTGGAGGATCAACTTTGCTTGTTTCTCTTATTTTTCTTGTAATTCATTATATTAGAGTGAGAAAGCATTGA 633 0.4044 MEVELGLKITRTRDDTTSISDFQFAKDRAGPLFLSKETDAMFTLTAHLKGYKKDNIDISISVDGTEISVSGEKEVQEMQMIPFKKELKIKGFRKKFKIPDGVVLDRIKAKYDEEDAALTIVMPKMEMAKGISGDGLEEVKEEEVVNKSVIQEAEQSAPEEVPDKTEEETAPVKKRGPKPWKPCPPLYLGGSTLLVSLIFLVIHYIRVRKH* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0723 210 Pfam Hsp20/alpha crystallin family 36 128 IPR002068 -
Lja5g0723 210 PANTHER HEAT SHOCK PROTEIN 26 1 172 IPR045045 -
Lja5g0723 210 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 23 142 IPR002068 -
Lja5g0723 210 PANTHER HSP20-LIKE CHAPERONES SUPERFAMILY PROTEIN 1 172 - -
Lja5g0723 210 MobiDBLite consensus disorder prediction 157 175 - -
Lja5g0723 210 PANTHER HSP20-LIKE CHAPERONES SUPERFAMILY PROTEIN 179 209 - -
Lja5g0723 210 SUPERFAMILY HSP20-like chaperones 35 129 IPR008978 -
Lja5g0723 210 MobiDBLite consensus disorder prediction 152 177 - -
Lja5g0723 210 Gene3D - 8 132 IPR008978 -
Lja5g0723 210 PANTHER HEAT SHOCK PROTEIN 26 179 209 IPR045045 -
Lja5g0723 210 CDD ACD_sHsps-like 36 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0723 Lja-Chr5 6664768 6665728 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0723 - - lja:Lj1g3v1442490.1 334.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0723 5 6664768 6665728 Lja5g0723 5 6664768 6665728 ECH
Lja2g2764 2 42117727 42123941 Lja5g0723 5 6664768 6665728 PCT