Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2764 ATGGAGCTTGCATTAGGGCTTAAAATCACAAAAACTAGAGATGACATTGCTTCCATCTCTGAGTATCAATTGGCCAAGGACAAAGGACCGGTCTTTCAGTCTAGAGAAACAAACACCATGTTCATCCTCTCTGCCTATCTTAAAGGTTATAAAAGGAATGATATTGACATCAAGATTAGTAAAGATGGTAGTAAGATATCAATTAGTGGAAAGAAGCCAATTCAGGAACTGTTGATGATGGGATGGGTAATGCACAGGAAAGAGGTTAAAATTACAGGGTTCAATAGGGTTTTCAAGATTCCTGATGGGGTGAATTTGGATAAAATCAAAGCAAAGTATGATGAAGAGGAATGGAGTATAAATATTTTCATGCCAAAATTGGTAAAAGGAATTTGTGGGGTTAGGATAGAAGAGGTCAAGGAAGAAGAATCTGAAGAAAGAGGGAAATCAGCTCAAGAGAAAAATGAAACTATACATGATCTTAGCTGTGTTGGAGAGACAAGCCAAAAAGGATCTAAAGAAGGAGTGGAGGGTAGTGAAAGTTTCATGGAGAATGGAGTATCTGATAAGATGCTTGATGATGCCAATAAGGAAATAAATAGGGAGACAATACAAAATGAAGTAGAGACATCCAATTTGGGAATTGATGGAAATGGAGAAAGTGTGAGGGAAAAGGTTGGCCAGGAAGGACATGAAGTAATGAAGATATCAGAGCATGACAAAAGTATTGCTGTACTTGTTTCCCAGAAGCTTGAAGATAGAAGCCAAGATAAAGATTCTGAGGTTCAAAAGTTGAAGGAGAGTGAAAATGTTGAGAAGAAGGAAAGAGGGGTATCGGACAAGAAGCTTGATGATGCCAGTGGGGACATAACTAGAAACAGAAGCCCAAAAGAAATAGAAGAAACTATGTTAAGGATTGAGGATGCAAAGGTCAAAGGGATGAGAGAAAGGGATAGAGAGGCACAATCTGTAGCAATGAAGACATCAGAAATAGAGCAAGATGTAGGTGCAGGTACCCCACAGAAAATTGGAGATACAAGTGGACATAAGGATTCTGATATTGGAGGAATGAAGGAGAATGGAAGTTTTGTGGAGAAGAAGGAAAAAATGGTATCTGATAACAGGATTGATGATGACAATGGAAACATAAATGAAGAGAAACAAAAGGGGGAAACTATAAGTACTGTGGAGAAGATGGAGACAGAGGAAACTAGCATGATAATGAGGGCCAATAATAGTCTTACTGAGGAAGATACATATGGAGAGTCTAAACAAAAACATTTTGGAGAACCAGTATGTGAAGCTGAGGATAGAGTTAAAGAAAGAGTGAAAGAAAGTAGTGTTGAAAGATTAGAAGAAATGAAGACATCAGAACTTGATGAAACTGTTTCTAATCATATTCCTAGCAACATTGTTGGTGCAAGCTTAAAAGAAGAATTTAAAGAACCTAAGATTCAACAAATGGAGAAAACTGACAGCAATGAAGGGAAAACTGATGGAGGGGTATCTGAAAGGATGCATTTTGAAGCCAATAAGGAAACTCAGAAAACTATATTTGGAGATACCATTCACAAGGACATAAAGAAGCCAAAGATTGAAACTGAGGGTGGAGATCAAGAATGTGTTAGAGAAAAGGTTGTTAAGGAAGAATTTGATAGAGTGATAAATTTATGTGAAGAGTTTCCTAAGCAGTTACCCAAAGGTAGTAATGAGGAAACTGAAGTAATAGATTTTACAAAATTAAAAGAAGCAAAAGATGTCAAAGAAGAAATGGTCAAAAGAAAGGGGAAAGAGATTGAATATTTTCTGGAGAAGGGTGAAGGTGAAGGACCCAAAGAGATGCCTTTGGAAGCAAAGGAAGGAAAAACAAAAGAGGTAATGCTAAAGGAAATTGGGAAGAGTAAGAATGGAACTAAGGATAGTGGTAAACAACAAGTACTTGAAAATACTGGTAAAGGAAGATTTGATGTATCAAACAGTATATCTGAAGAGCTGCCAAAGCAGGTAGCAGAGCAAGATGGGAGCAAAGGATTCAAGGTTGCAAATATGGAAGAACTAAAAGAGGTGATCAAAGAGGAAATGGCTGAAAATGAAAGTTCAATGGCAAAGGTGGAAGGAGAAGCATCAAAGAAGAGAACTGAGGAAGTTATTGAGAAAAGCACAGTAACTGAGACCTTAGAGAAGGAAACTGAGGGCTCTAAGATTAAAAGAAAGGCCATAGATAAACCACATAAAGGAGCGTTAGTACTAAAGGATCCTGTGACTCGAAGTAAGGGGAAAGGTCAACATGGTTTGCAAAATGACATGAGTAAAGGAAGGTTCCAAGCAAGCGAGGCTTCTAAAGAAGAGTTTCCAACAAAGAAAATAGAGTCACTAGAAAGTACAAGAGAGGGACTGCAGGATACAAAGATAGAAGAATCAAAAGAAGGGACAGCCAAGAAAAAGAGTATGGAAAAGATGGAGAAATCAGATTATGGCAAAGAAGAGGGTGCAAAAATTGAGCAACTTGTGAAAAAAGTAAGAGAAAAGAAATATGAAAAGGTCCAAGTTGAAGAAGATGGTGGTCTGAGGAAAGATATAACTAGGGAGAACACACATGAAGAAACACAAGAGCCTAAGGTTCTAGGTAAGGAAAAAAATCAGCATTGTTTATATGAAGAGATGGGGAAAGGAACATATGAAGCCAGCTCTACAGCAAGAAAGTTTCCTATGAAAGTTGCAGATTCACTTGGAAAGACAAGAGAGGGATCAAAGGATAAAGAGATAGAAGAATCAGAAGAGGTCAAAGGAGATGAGGCGATAATAATGAGTGGGGAGACAGAACTTTTTGGTTCTACAACAAAGAAAAAAATTGAAGAGTCTCAGAGTGGAAGAACTGCCCAGACTTTGCAAGAAGCACCAGAGGAAAAACATCCAAAAGCAGTAGAGAAAAGAACTCCTGAAAGAGATTTGCAATCTGCAAAAGTAGAAGGTAAGGAATTGAACGAGGTTGAACAAGGGAGTGCACAGGATAAGAGACAGAAGACAAAGCTGCTACCTCCAACAATTCAAAGCAATGAGACTCATGAATCAAAGAATGATCAAAGTGCCAGCCAAGGTACTTTACAGCCAAAGAAATCAAAACATGTGGGAGAAAGACAACAATACACTAATGACAAAGAGATCACCAAAGAGGTTCCAACTATAGAAGATCAAGTGGATAAACCATCATCAGTATCATGGTTTCCATCAACTCAGCAATCCCAGATAGATGAGAAAGATAAACTATATGAAGGTAGTGCAGCAAAATATAAAGCATCACAAGAATCACAAAAGGAAGATCCTACTAAAGAGATGCAAAATTTAATTGAAATGAAGGAGAACCAAGAATGTAAACAAACGGAAAAATTGAAGCCAAAAAATCCTCTAGAGAAGAACTATAAGAAAGGAGAAGTCATTACAAAAGATGAACTTCACAGAAGACAAAAAGGGAGGGAGACAATTCAAGAAGAAACTGCAGAGCCTAAAATTAAAATTGATGATAGAGATCAACAATATGTGCCAATGGATTTTGGCAAGGTAGTTGTAAAAGTACTTACTATAGAAAATGAGATGATCGAAAAAGAATATGTAGCAGATGCTAGCCCAATAGCTGAACCTGAAAGGATGGAAATCAAAAGGGACTTCAGTGCAAATCTTAAAAGAGATGACAACACTACTGAAAATGTTATTGATGAGAAGCCCAAGTTACAGGAGGAAATTCTAAAAGCTGATAATGAAAAGGTGGATACAATTAAATGCATCTCAGAGTCTATGAAAACCTCACAAGAGAAAGAGCTTCATATGAAATCAGAAGCTTTTGAGAAAGAAGCAGAGTCTTCACTTGAAAGTGTAGAAAGTGTGGGAGTTGAAGAGGCGGTTCCGAAAAATCAGATTGAAGAGCTACAGCAGAAAGACTTGTCACCTCTAACAGAAGAAATGAGAAGCAAAGAGCCTCTAGAATTTGAAAAACCAGTTATAGAATGGAAATTTCCAAAGACAAAAGGGGATGGCCCTTTACTAGAATCGAGAGAGAGGGAACGATATGGTTACAGCTCCGAAGACACTAAAGCTGCAAAAGAAGAGATGCCAAAAAAAGTACAACAATATGTTCCAATAGATTTTGGCAAGGTAGTTGTAAAAGAACTGACTATAGAAAATGAGATGCCAAAAAAAGAATACACACAAGCTGAACCTGAAAGGATGGAAACCAAAAGTGGCTTGAAAGCAACTTTTGAAAGAGATGAACACACTGTTGAAAATGTTATTGATGAGCAGTCCAGGATACAGGATGAAATTTTAAAAGCTTATACTGGAATGGTGGATAAAGCTAAATGTATCCCAGAGTCCATGGAATCAACACAAGAGAAAGAGCATTATACAAAATCAGAAGTAGTTGAGAAAGAAGCAGAATCATTGGAAGCAATGTCTTCACTTCCAAGTGTAGAAAGTGTGGAAGGTGAAGAGACGGTTCCAAAGAATGAGATTGAAGAGCTACAGCAGAAAGATTTGTCACCTCTAACAGCAGAGATGAAAAGCAAAGAGCCTCAGGAATTAGAAAAGCCAACTAGAGAATGGAAATTACCAAAGACAAAAGGGGATGTACCTTTACCAGAATTGAGAGAAAGGGAACGATATGGTTACGGCTCAGAAGACACGAAAGCACCAAAAATTACAGCATATCAAGAAGAGTTATTGAAACAAGGCCATGGAGAAGAAACCGTTCTTGAGAAAAGGAAAGGGTCAAAGTTTGCAAACAGTGAAGAAGCCAAAGAGGCTTCAAGACAATTACTCAAAGGAGAGAATGGAAAAACTACTCAAACAGCAGAAGAAAAGAAGCCTAAAATGAAGGAAATAACTCCAGAATTTGAAAATGCTAGTGGATTGAAACAGGTTGCAGAAAAAATGCATGAGACTGGAAAGAGAGAACATCAATCAGAAGAAGTCACTACTAAAATGGGGGCTGACCCTCCAACACCGATTGAAATAACTCGAAACAAAGAAGTTGAAAGGAAAGAGCCTCGCGTATTATCAAGGCCAAGCATAGAGAATGAAATGCCAATGATAAAGGATCCACAGCAAGAAAAGGAGGAGGAAAGGCTCATTCATGCACTGGAACTAGAAGCAACTACTTCAAAAGAAGAAGGATTTGCACAAGCTACAAAAAAACTTTCTAATGCAAAGAGTAACGCTGAGCCAAAATTTGACATTGATAAGCCAAAAGAATCAATTGAACCCACAGAAGGAGCTACAACATCAGAGGTAGTAGCAGATAAAGGGGCTCAACTATCAAAATTTTCAAGCTCATCAAGCACTCAGCAGCAGTTTGAAGTTGAAGAAAAAGACAAAAAAGATGCTGATCATGAAGTTGGACATCAAGGGTCACAAGAAATAAAGGACTCTAATATAAATGTACAAGAGTCAACCAGAATTGAAACAGAACAAGCAGTTGACAAAATAGAAAATCTACAACCACAGTCCCCTGCAGATCAACAATGCATAATAAACAAAGATCAGGAACAAAAACATGAAATTGAAGAAGAAAGAGCCTATGAGCAAAGAGATGAAGTATGTGGGGAAGACTTTCAAGTATTAGAGGAGCAAAAAGAATGTAAAGAGGAAGCGAGTGGAGGGAAAAAGGAGACAAAATGGTCAAAGAAATTGTATGTTCCTTTGGTCTTAGCAGGAACAGCTCTCCTTGTATCTCTTGTATTTGTATTTGTTCGGCATAGAAAAGCTAGAAAAAGATAA 5769 0.3772 MELALGLKITKTRDDIASISEYQLAKDKGPVFQSRETNTMFILSAYLKGYKRNDIDIKISKDGSKISISGKKPIQELLMMGWVMHRKEVKITGFNRVFKIPDGVNLDKIKAKYDEEEWSINIFMPKLVKGICGVRIEEVKEEESEERGKSAQEKNETIHDLSCVGETSQKGSKEGVEGSESFMENGVSDKMLDDANKEINRETIQNEVETSNLGIDGNGESVREKVGQEGHEVMKISEHDKSIAVLVSQKLEDRSQDKDSEVQKLKESENVEKKERGVSDKKLDDASGDITRNRSPKEIEETMLRIEDAKVKGMRERDREAQSVAMKTSEIEQDVGAGTPQKIGDTSGHKDSDIGGMKENGSFVEKKEKMVSDNRIDDDNGNINEEKQKGETISTVEKMETEETSMIMRANNSLTEEDTYGESKQKHFGEPVCEAEDRVKERVKESSVERLEEMKTSELDETVSNHIPSNIVGASLKEEFKEPKIQQMEKTDSNEGKTDGGVSERMHFEANKETQKTIFGDTIHKDIKKPKIETEGGDQECVREKVVKEEFDRVINLCEEFPKQLPKGSNEETEVIDFTKLKEAKDVKEEMVKRKGKEIEYFLEKGEGEGPKEMPLEAKEGKTKEVMLKEIGKSKNGTKDSGKQQVLENTGKGRFDVSNSISEELPKQVAEQDGSKGFKVANMEELKEVIKEEMAENESSMAKVEGEASKKRTEEVIEKSTVTETLEKETEGSKIKRKAIDKPHKGALVLKDPVTRSKGKGQHGLQNDMSKGRFQASEASKEEFPTKKIESLESTREGLQDTKIEESKEGTAKKKSMEKMEKSDYGKEEGAKIEQLVKKVREKKYEKVQVEEDGGLRKDITRENTHEETQEPKVLGKEKNQHCLYEEMGKGTYEASSTARKFPMKVADSLGKTREGSKDKEIEESEEVKGDEAIIMSGETELFGSTTKKKIEESQSGRTAQTLQEAPEEKHPKAVEKRTPERDLQSAKVEGKELNEVEQGSAQDKRQKTKLLPPTIQSNETHESKNDQSASQGTLQPKKSKHVGERQQYTNDKEITKEVPTIEDQVDKPSSVSWFPSTQQSQIDEKDKLYEGSAAKYKASQESQKEDPTKEMQNLIEMKENQECKQTEKLKPKNPLEKNYKKGEVITKDELHRRQKGRETIQEETAEPKIKIDDRDQQYVPMDFGKVVVKVLTIENEMIEKEYVADASPIAEPERMEIKRDFSANLKRDDNTTENVIDEKPKLQEEILKADNEKVDTIKCISESMKTSQEKELHMKSEAFEKEAESSLESVESVGVEEAVPKNQIEELQQKDLSPLTEEMRSKEPLEFEKPVIEWKFPKTKGDGPLLESRERERYGYSSEDTKAAKEEMPKKVQQYVPIDFGKVVVKELTIENEMPKKEYTQAEPERMETKSGLKATFERDEHTVENVIDEQSRIQDEILKAYTGMVDKAKCIPESMESTQEKEHYTKSEVVEKEAESLEAMSSLPSVESVEGEETVPKNEIEELQQKDLSPLTAEMKSKEPQELEKPTREWKLPKTKGDVPLPELRERERYGYGSEDTKAPKITAYQEELLKQGHGEETVLEKRKGSKFANSEEAKEASRQLLKGENGKTTQTAEEKKPKMKEITPEFENASGLKQVAEKMHETGKREHQSEEVTTKMGADPPTPIEITRNKEVERKEPRVLSRPSIENEMPMIKDPQQEKEEERLIHALELEATTSKEEGFAQATKKLSNAKSNAEPKFDIDKPKESIEPTEGATTSEVVADKGAQLSKFSSSSSTQQQFEVEEKDKKDADHEVGHQGSQEIKDSNINVQESTRIETEQAVDKIENLQPQSPADQQCIINKDQEQKHEIEEERAYEQRDEVCGEDFQVLEEQKECKEEASGGKKETKWSKKLYVPLVLAGTALLVSLVFVFVRHRKARKR* 1923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2764 1922 MobiDBLite consensus disorder prediction 906 1174 - -
Lja2g2764 1922 MobiDBLite consensus disorder prediction 248 389 - -
Lja2g2764 1922 MobiDBLite consensus disorder prediction 202 221 - -
Lja2g2764 1922 MobiDBLite consensus disorder prediction 478 514 - -
Lja2g2764 1922 MobiDBLite consensus disorder prediction 1695 1716 - -
Lja2g2764 1922 PANTHER - 1 161 - -
Lja2g2764 1922 MobiDBLite consensus disorder prediction 1720 1734 - -
Lja2g2764 1922 MobiDBLite consensus disorder prediction 606 625 - -
Lja2g2764 1922 MobiDBLite consensus disorder prediction 1066 1083 - -
Lja2g2764 1922 PANTHER HEAT SHOCK PROTEIN 26 1735 1921 IPR045045 -
Lja2g2764 1922 PANTHER HEAT SHOCK PROTEIN 26 1568 1739 IPR045045 -
Lja2g2764 1922 PANTHER HEAT SHOCK PROTEIN 26 764 821 IPR045045 -
Lja2g2764 1922 MobiDBLite consensus disorder prediction 694 751 - -
Lja2g2764 1922 MobiDBLite consensus disorder prediction 1782 1801 - -
Lja2g2764 1922 MobiDBLite consensus disorder prediction 638 661 - -
Lja2g2764 1922 MobiDBLite consensus disorder prediction 1339 1369 - -
Lja2g2764 1922 MobiDBLite consensus disorder prediction 964 1005 - -
Lja2g2764 1922 MobiDBLite consensus disorder prediction 694 829 - -
Lja2g2764 1922 PANTHER HEAT SHOCK PROTEIN 26 636 743 IPR045045 -
Lja2g2764 1922 PANTHER HEAT SHOCK PROTEIN 26 829 1257 IPR045045 -
Lja2g2764 1922 SUPERFAMILY HSP20-like chaperones 30 117 IPR008978 -
Lja2g2764 1922 MobiDBLite consensus disorder prediction 1039 1064 - -
Lja2g2764 1922 MobiDBLite consensus disorder prediction 775 829 - -
Lja2g2764 1922 MobiDBLite consensus disorder prediction 1611 1626 - -
Lja2g2764 1922 MobiDBLite consensus disorder prediction 248 325 - -
Lja2g2764 1922 Coils Coil 680 707 - -
Lja2g2764 1922 MobiDBLite consensus disorder prediction 165 189 - -
Lja2g2764 1922 MobiDBLite consensus disorder prediction 1575 1812 - -
Lja2g2764 1922 PANTHER - 764 821 - -
Lja2g2764 1922 MobiDBLite consensus disorder prediction 346 389 - -
Lja2g2764 1922 MobiDBLite consensus disorder prediction 1283 1325 - -
Lja2g2764 1922 PANTHER - 1370 1458 - -
Lja2g2764 1922 PANTHER - 581 627 - -
Lja2g2764 1922 PANTHER - 636 743 - -
Lja2g2764 1922 MobiDBLite consensus disorder prediction 1575 1604 - -
Lja2g2764 1922 PANTHER - 1568 1739 - -
Lja2g2764 1922 PANTHER - 829 1257 - -
Lja2g2764 1922 MobiDBLite consensus disorder prediction 856 881 - -
Lja2g2764 1922 Coils Coil 789 809 - -
Lja2g2764 1922 MobiDBLite consensus disorder prediction 1100 1174 - -
Lja2g2764 1922 MobiDBLite consensus disorder prediction 1669 1685 - -
Lja2g2764 1922 MobiDBLite consensus disorder prediction 1640 1656 - -
Lja2g2764 1922 MobiDBLite consensus disorder prediction 419 433 - -
Lja2g2764 1922 MobiDBLite consensus disorder prediction 140 159 - -
Lja2g2764 1922 CDD ACD_sHsps-like 35 114 - -
Lja2g2764 1922 PANTHER - 1735 1921 - -
Lja2g2764 1922 MobiDBLite consensus disorder prediction 760 774 - -
Lja2g2764 1922 MobiDBLite consensus disorder prediction 1477 1563 - -
Lja2g2764 1922 MobiDBLite consensus disorder prediction 1519 1557 - -
Lja2g2764 1922 Coils Coil 248 268 - -
Lja2g2764 1922 MobiDBLite consensus disorder prediction 409 433 - -
Lja2g2764 1922 Coils Coil 136 156 - -
Lja2g2764 1922 MobiDBLite consensus disorder prediction 1006 1038 - -
Lja2g2764 1922 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 23 142 IPR002068 -
Lja2g2764 1922 MobiDBLite consensus disorder prediction 630 661 - -
Lja2g2764 1922 MobiDBLite consensus disorder prediction 907 934 - -
Lja2g2764 1922 PANTHER HEAT SHOCK PROTEIN 26 581 627 IPR045045 -
Lja2g2764 1922 PANTHER HEAT SHOCK PROTEIN 26 1 161 IPR045045 -
Lja2g2764 1922 Coils Coil 833 853 - -
Lja2g2764 1922 Gene3D - 27 129 IPR008978 -
Lja2g2764 1922 PANTHER HEAT SHOCK PROTEIN 26 1370 1458 IPR045045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2764 Lja-Chr2 42117727 42123941 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2764 - - lja:Lj0g3v0164099.1 1761.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2764 2 42117727 42123941 Lja2g2764 2 42117727 42123941 ECH
Lja2g2764 2 42117727 42123941 Lja5g0723 5 6664768 6665728 PCT