Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0669 ATGAATAAAGTAGTGCTAAAAGTGGAACTACTCGATGACAAAATTAAGAAAAAAGCTATGAAGAAAGTCTCTAATATTTCAGGGATTGAGTCAGTCTCTATGGATATGAATGAGCAGAAACTGACCTTAACTGGGGACATTGACCCTGTGGCAGTGGTGGGTAAGCTGAGGAAGCTGTGTCATACTGAGATACTCTCTGTTGGACCAGCCAAGGAACCTCCTAAGAAAGAAGAGAGAAAGAAGCCAGAGGATCAGAAGAAGAAAACCGATCAGAATCAGAATCAGAATCATAATCAGAACATGGTTGATATTGCGAAGGTATATGAAGCATGTCAGAATCAGATGATGAGACAGCCACATTACTATTACACTAGTGTGGAAGAGAATCCTAATGCCTGTGTCATCTGCTAA 411 0.4039 MNKVVLKVELLDDKIKKKAMKKVSNISGIESVSMDMNEQKLTLTGDIDPVAVVGKLRKLCHTEILSVGPAKEPPKKEERKKPEDQKKKTDQNQNQNHNQNMVDIAKVYEACQNQMMRQPHYYYTSVEENPNACVIC* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0669 136 MobiDBLite consensus disorder prediction 70 91 - -
Lja5g0669 136 Pfam Heavy-metal-associated domain 7 58 IPR006121 GO:0046872
Lja5g0669 136 MobiDBLite consensus disorder prediction 65 100 - -
Lja5g0669 136 Gene3D - 1 72 - -
Lja5g0669 136 SUPERFAMILY HMA, heavy metal-associated domain 6 60 IPR036163 GO:0046872
Lja5g0669 136 PANTHER ION-BINDING PROTEIN, PUTATIVE-RELATED 1 136 - -
Lja5g0669 136 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 1 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0669 Lja-Chr5 6032042 6033234 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0669 - - gmx:100793345 154.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0669 5 6032042 6033234 Lja5g0669 5 6032042 6033234 ECH
Lja2g2670 2 37759901 37760828 Lja5g0669 5 6032042 6033234 PCT