Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2670 ATGATGAAACTAGTGTTAAAGGTGGAGTTACATGATGACAAAATCAAGCAAAAAGCTATGAAGTCAGTCTCTGGCATTTCAGGGGTTGAGTCTGTTTCTGTTGACATGGGAAGCAAGAAATTGACCTTAACTGGAGATATAGATCCTGTACATGTAGTGAGCAAACTAAGGAAGTGGTGTCATACTGAAATAGTTTCTGTTGGACCTGCAAAAGAGGAGAAAAAGAAGGATGAATCATCTAAGCCAGATCAACCAAAATTGCCTGAGCCAGTCAAGTTCTATGAAGCTTATCCCCTTTATTATCAGACAAGACCATCACAATACACTCAATATCATTATGTTCAAAGTGTTGAAGAGGATAATGTTGGGTGTGTCATCTGCTGA 384 0.388 MMKLVLKVELHDDKIKQKAMKSVSGISGVESVSVDMGSKKLTLTGDIDPVHVVSKLRKWCHTEIVSVGPAKEEKKKDESSKPDQPKLPEPVKFYEAYPLYYQTRPSQYTQYHYVQSVEEDNVGCVIC* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2670 127 SUPERFAMILY HMA, heavy metal-associated domain 2 60 IPR036163 GO:0046872
Lja2g2670 127 MobiDBLite consensus disorder prediction 68 85 - -
Lja2g2670 127 MobiDBLite consensus disorder prediction 68 90 - -
Lja2g2670 127 Gene3D - 1 73 - -
Lja2g2670 127 PANTHER ION-BINDING PROTEIN, PUTATIVE-RELATED 1 127 - -
Lja2g2670 127 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 1 127 - -
Lja2g2670 127 Pfam Heavy-metal-associated domain 6 58 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2670 Lja-Chr2 37759901 37760828 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2670 - - lja:Lj0g3v0240899.1 182.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2670 2 37759901 37760828 Lja2g2670 2 37759901 37760828 ECH
Lja2g2670 2 37759901 37760828 Lja5g0669 5 6032042 6033234 PCT