Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0667 ATGGCAGATGTTCAAATGCGTGACGCCGAGACCTTCGCATTCCAGGCTGAGATCAACCAACTCCTCAGCCTCATCATCAACACCTTCTACAGCAACAAGGAGATTTTCCTCCGTGAACTCATCAGTAATGCCTCCGACGCTCTGGATAAAATTCGATTTGAGAGCCTCACCGATAAGACGAAGCTTGATGCTCAACCAGAGCTTTTCATTAGACTCGTTCCTGACAAGGCTAACAAGACTCTCTCCATCATTGACAGTGGCGTTGGCATGACCAAAGCAGATTTGGTGAACAATTTGGGAACCATTGCGAGGTCTGGGACGAAGGAATTCATGGAAGCGTTACAGGCTGGGGCTGATGTTAGCATGATTGGCCAATTTGGCGTTGGTTTCTACTCTGCTTACCTTGTTGCTGAGAAGGTCATTGTGACCACCAAGCACAATGACGATGAACAGTACATTTGGGAATCACAGGCTGGTGGATCCTTCACTGTGATCAGGGATGTGAATGGTGAACAATTAGGAAGAGGAACTAAGATTACCTTGTTCCTCAAGGAGGATCAGTTGGAGTATTTGGAGGAGAGAAGGATTAAGGATCTTGTGAAGAAGCACTCTGAATTCATTAGCTATCCAATTTACCTCTGGACTGAGAAGACAACTGAGAAGGAGATCAGTGATGATGAGGAGGATGATGAGTCCAAGAAGGAGAAGGAAGGAGAAGTTGAGGATGTTGATGAAGAGAAGGAGAAGGATTCTAAGAAGAAGAAGATTAAGGAGGTTTCTCATGAGTGGGAACTCATCAACAAGCAGAAACCAATCTGGCTGCGAAAGCCAGAGGAGATTACCAAGGATGAGTATGCTTCCTTCTACAAGAGCCTCACCAATGACTGGGAAGACCACTTGGCTGTCAAGCATTTCTCAGTGGAGGGTCAGCTTGAGTTCAAGGCCATTCTATTTGTTCCCAAAAGGGCACCTTTTGATCTGTTTGACACAAGAAAGAAGATGAACAACATCAAGCTTTATGTGAGGAGGGTGTTCATCATGGACAATTGTGAGGAGCTGATTCCTGAGTATCTTGGGTTTGTCAAGGGTGTGGTTGACTCTGATGACTTGCCACTCAACATTTCCAGGGAGATGCTGCAGCAGAACAAGATCTTGAAGGTGATCAGGAAGAATCTTGTGAAGAAATGCATTGAGATGTTCAACGAGATCGCGGAGAATAAAGAGGATTACAACAAATTCTATGATGCTTTCTCCAAGAACTTGAAGCTGGGTATCCATGAAGATAGTCAGAACAGGGCTAAATTGGCTGATTTGCTGAGATACTATTCTACAAAGAGTGGAGATGAGTTGACTAGTCTCAAGGACTATGTTACCAGAATGAAGGAGGGGCAGAAGGACATTTACTATATCACAGGAGAGAGCAAGAAGGCTGTGGAGAATTCACCATTCTTGGAGAGGCTGAAAAAGAAGGGGTATGAGGTGCTGTTCATGGTGGATGCAATTGATGAGTATGCTGTTGGGCAATTGAAAGAGTATGATGGGAAGAAGTTGGTTTCTGCTACTAAGGAGGGATTGAAATTGGATGATGAAAGCGAGGAAGAGAAGAAGAAGAAAGAGGAAAAGAAGAAGTCATTTGAGGATCTTTGCAGGACAATGAAGGACATCTTGGGAGACAGAGTTGAGAAAGTGGTTGTCTCTGACAGGATTGTGGATTCACCCTGCTGTTTGGTGACAGGGGAATACGGATGGACTGCGAACATGGAGAGGATCATGAAGGCTCAGGCGTTGAGGGATAGCAGCATGAGCAGCTACATGTCGAGCAAGAAGACCATGGAGATTAACCCGGATAATGGGATCATGGAGGAGCTGAGGAAGAGGGCTGAAGCTGATAAAAATGATAAATCAGTGAAGGATTTGGTGTTGCTTCTCTTTGAGACTGCACTCTTGACTTCTGGTTTCAGCCTTGATGATCCAAACACATTTGCTGCTAGAATTCACAGGATGTTGAAGCTTGGTCTTAGCATTGATGAGGAGGAGACTGGTGGAGATGAAGATATGCCTCCACTGGAGGAGGATGGTGCTGAGGAGAGTAAGATGGAGGAAGTTGACTAA 2112 0.4508 MADVQMRDAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNASDALDKIRFESLTDKTKLDAQPELFIRLVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAEKVIVTTKHNDDEQYIWESQAGGSFTVIRDVNGEQLGRGTKITLFLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISDDEEDDESKKEKEGEVEDVDEEKEKDSKKKKIKEVSHEWELINKQKPIWLRKPEEITKDEYASFYKSLTNDWEDHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKMNNIKLYVRRVFIMDNCEELIPEYLGFVKGVVDSDDLPLNISREMLQQNKILKVIRKNLVKKCIEMFNEIAENKEDYNKFYDAFSKNLKLGIHEDSQNRAKLADLLRYYSTKSGDELTSLKDYVTRMKEGQKDIYYITGESKKAVENSPFLERLKKKGYEVLFMVDAIDEYAVGQLKEYDGKKLVSATKEGLKLDDESEEEKKKKEEKKKSFEDLCRTMKDILGDRVEKVVVSDRIVDSPCCLVTGEYGWTANMERIMKAQALRDSSMSSYMSSKKTMEINPDNGIMEELRKRAEADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFAARIHRMLKLGLSIDEEETGGDEDMPPLEEDGAEESKMEEVD* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0667 703 MobiDBLite consensus disorder prediction 523 542 - -
Lja5g0667 703 CDD HATPase_Hsp90-like 19 207 - -
Lja5g0667 703 SUPERFAMILY Ribosomal protein S5 domain 2-like 268 523 IPR020568 -
Lja5g0667 703 SUPERFAMILY HSP90 C-terminal domain 547 669 IPR037196 -
Lja5g0667 703 MobiDBLite consensus disorder prediction 678 703 - -
Lja5g0667 703 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 186 IPR003594 -
Lja5g0667 703 Coils Coil 522 548 - -
Lja5g0667 703 MobiDBLite consensus disorder prediction 236 251 - -
Lja5g0667 703 Gene3D - 8 233 IPR036890 -
Lja5g0667 703 Gene3D - 267 435 - -
Lja5g0667 703 PANTHER HEAT SHOCK PROTEIN 90 FAMILY MEMBER 1 702 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Lja5g0667 703 PANTHER HEAT SHOCK PROTEIN 90-1 1 702 - -
Lja5g0667 703 Pfam Hsp90 protein 189 699 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Lja5g0667 703 PRINTS 90kDa heat shock protein signature 175 192 IPR020575 -
Lja5g0667 703 PRINTS 90kDa heat shock protein signature 10 30 IPR020575 -
Lja5g0667 703 PRINTS 90kDa heat shock protein signature 98 115 IPR020575 -
Lja5g0667 703 PRINTS 90kDa heat shock protein signature 193 211 IPR020575 -
Lja5g0667 703 PRINTS 90kDa heat shock protein signature 80 97 IPR020575 -
Lja5g0667 703 PRINTS 90kDa heat shock protein signature 123 145 IPR020575 -
Lja5g0667 703 PRINTS 90kDa heat shock protein signature 31 53 IPR020575 -
Lja5g0667 703 ProSitePatterns Heat shock hsp90 proteins family signature. 30 39 IPR019805 GO:0005524|GO:0006457|GO:0051082
Lja5g0667 703 Gene3D - 523 674 IPR037196 -
Lja5g0667 703 MobiDBLite consensus disorder prediction 676 703 - -
Lja5g0667 703 MobiDBLite consensus disorder prediction 220 251 - -
Lja5g0667 703 Gene3D - 436 522 - -
Lja5g0667 703 Coils Coil 233 253 - -
Lja5g0667 703 SMART HKATPase_4 32 187 IPR003594 -
Lja5g0667 703 PIRSF HSP90_HTPG 1 703 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Lja5g0667 703 Hamap Chaperone protein HtpG [htpG]. 7 670 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Lja5g0667 703 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 10 218 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0667 Lja-Chr5 6016698 6019242 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0667 K04079 - rcu:8277096 1213.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2668 2 37577215 37580595 Lja5g0667 5 6016698 6019242 ECH
Lja5g0667 5 6016698 6019242 Lja5g0667 5 6016698 6019242 ECH