Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2668 ATGGCAGACGCTGAAACCTTCGCTTTCCAGGCTGAGATCAACCAACTCCTCAGCCTCATCATCAACACCTTCTATAGCAACAAGGAGATTTTCTTGCGTGAACTCATCAGCAATGCTTCTGATGCTTTGGATAAGATTCGATTTGAGAGCTTAACAGACAAGAGCAAGCTCGATGGTCAACCGGAGCTTTTTATCAGGCTCGTCCCTGATAAGGACAACAAGACTCTTTCCATTTTTGACAGTGGCATTGGCATGACCAAAGCAGATTTGGTGAACAATTTGGGTACAATTGCGAGATCTGGGACCAAGGAATTCATGGAGGCGTTGCAGGCTGGTGCCGATGTCAGCATGATTGGTCAATTTGGTGTTGGGTTCTACTCTGCGTACCTTGTTGCTGAGAAAGTCATTGTCACGACAAAGCACAATGACGACGAACAGTACATTTGGGAATCGCAGGCCGGCGGCTCTTTCACCGTTACAAGGGACGTCGAAGGCGAGCAACTAGGAAGGGGAACCAAGATTACCCTCTTCCTTAAGGAGGATCAGTTGGAATACTTGGAGGAGAGGAGGATCAAGGATCTTGTGAAGAAGCACTCTGAATTTATCAGCTATCCCATTTATCTTTGGACTGAGAAGACTACCGAAAAAGAGATCAGCGATGATGAAGATGATGAGCCCAAGAAGGAGGAAGAAGGAGATGTTGAGGAGGTTGACGAGGAGGAGGAGAAGGAATCTAAGAAGAAGAAGATTAAGGAGGTTTCTCATGAGTGGGAACTCATCAACAAGCAGAAGCCTATCTGGTTGCGGAAGCCAGAAGAGATCACCAAGGATGAATATGCTTCTTTCTACAAGAGCTTAACCAATGACTGGGAAGACCACTTGGCTGTGAAACATTTCGCTGTGGAGGGCCAGCTTGAATTCAAAGCCATCCTGTTTGTTCCGAAAAGGGCACCCTTTGATTTGTTTGACACAAGGAAGAAGATGAACAACATCAAGCTCTATGTCAGGAGGGTGTTTATCATGGACAATTGTGAGGAGCTTATACCTGAGTACCTTGGATTTGTGAAAGGTGTTGTTGATTCTGATGACTTGCCGCTCAACATTTCTCGTGAGATGCTGCAACAGAACAAAATCTTGAAGGTCATCAGGAAGAATCTTGTGAAGAAGTGCATTGAGATGTTCAATGAGATTGCTGAGAACAAGGAAGACTACAACAAGTTCTATGATGCTTTCTCCAAGAATTTGAAGCTGGGTATCCATGAGGATAGTCAGAACAGGGTCAAATTAGCTGATTTGCTCAGATACCACTCTACAAAAAGTGGAGATGAGTTGACAAGCTTGAAGGACTATGTTACCAGAATGAAGGAGGGCCAGAAAGACATCTACTACATTACTGGAGAGAGCAAAAAGGCTGTGGAGAATTCTCCATTTTTGGAGAGACTGAAGAAGAAGGGCTATGAGGTGCTTTTCATGGTGGACGCCATTGATGAGTATGCTGTTGGACAACTTAAAGAGTACGATGGCAAAAAATTGGTTTCAGCTACAAAGGAAGGATTGAAATTGGACGATGAGACTGAGGAGGAGAAAAAGAAAAAGGAGGAGAAGAAGAAGTCATTTGAGGATCTCTGCAAAGTCATCAAGGAAATCTTGGGAGATAAAGTTGAGAAGGTTGTTGTTTCTGACAGGATTGTTGATTCTCCATGCTGTTTGGTGACTGGTGAGTATGGATGGACTGCAAACATGGAGAGGATCATGAAGGCTCAGGCTCTGAGAGATAGCAGCATGAGTGGCTACATGTCTAGCAAGAAGACTATGGAAATCAACCCTGATAATGGCATTATGGAGGAGTTGAGGAAGAGGGCAGAAGCTGACAAGAATGACAAGTCAGTGAAGGACCTAGTGTTGCTTCTCTTTGAGACCGCACTCTTGACTTCAGGCTTCAGCCTGGAAGATCCCAACACTTTCGCTGCAAGAATTCACAGGATGTTGAAGTTGGGTTTGAGTATTGATGAGGAAGCTGGTGAAGATGATGTTGACATGCCTCCACTTGAAGAGGACGGTGCTGAGGAGAGCAAGATGGAAGAAGTGGACTAA 2094 0.4475 MADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNASDALDKIRFESLTDKSKLDGQPELFIRLVPDKDNKTLSIFDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAEKVIVTTKHNDDEQYIWESQAGGSFTVTRDVEGEQLGRGTKITLFLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISDDEDDEPKKEEEGDVEEVDEEEEKESKKKKIKEVSHEWELINKQKPIWLRKPEEITKDEYASFYKSLTNDWEDHLAVKHFAVEGQLEFKAILFVPKRAPFDLFDTRKKMNNIKLYVRRVFIMDNCEELIPEYLGFVKGVVDSDDLPLNISREMLQQNKILKVIRKNLVKKCIEMFNEIAENKEDYNKFYDAFSKNLKLGIHEDSQNRVKLADLLRYHSTKSGDELTSLKDYVTRMKEGQKDIYYITGESKKAVENSPFLERLKKKGYEVLFMVDAIDEYAVGQLKEYDGKKLVSATKEGLKLDDETEEEKKKKEEKKKSFEDLCKVIKEILGDKVEKVVVSDRIVDSPCCLVTGEYGWTANMERIMKAQALRDSSMSGYMSSKKTMEINPDNGIMEELRKRAEADKNDKSVKDLVLLLFETALLTSGFSLEDPNTFAARIHRMLKLGLSIDEEAGEDDVDMPPLEEDGAEESKMEEVD* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2668 697 MobiDBLite consensus disorder prediction 215 247 - -
Lja2g2668 697 MobiDBLite consensus disorder prediction 671 697 - -
Lja2g2668 697 SMART HKATPase_4 27 182 IPR003594 -
Lja2g2668 697 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 181 IPR003594 -
Lja2g2668 697 MobiDBLite consensus disorder prediction 217 240 - -
Lja2g2668 697 Pfam Hsp90 protein 184 692 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Lja2g2668 697 PRINTS 90kDa heat shock protein signature 5 25 IPR020575 -
Lja2g2668 697 PRINTS 90kDa heat shock protein signature 170 187 IPR020575 -
Lja2g2668 697 PRINTS 90kDa heat shock protein signature 75 92 IPR020575 -
Lja2g2668 697 PRINTS 90kDa heat shock protein signature 26 48 IPR020575 -
Lja2g2668 697 PRINTS 90kDa heat shock protein signature 118 140 IPR020575 -
Lja2g2668 697 PRINTS 90kDa heat shock protein signature 93 110 IPR020575 -
Lja2g2668 697 PRINTS 90kDa heat shock protein signature 188 206 IPR020575 -
Lja2g2668 697 SUPERFAMILY Ribosomal protein S5 domain 2-like 262 517 IPR020568 -
Lja2g2668 697 CDD HATPase_Hsp90-like 14 202 - -
Lja2g2668 697 Gene3D - 517 668 IPR037196 -
Lja2g2668 697 Gene3D - 261 429 - -
Lja2g2668 697 PIRSF HSP90_HTPG 1 697 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Lja2g2668 697 ProSitePatterns Heat shock hsp90 proteins family signature. 25 34 IPR019805 GO:0005524|GO:0006457|GO:0051082
Lja2g2668 697 PANTHER HEAT SHOCK PROTEIN 90 FAMILY MEMBER 1 696 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Lja2g2668 697 Gene3D - 2 228 IPR036890 -
Lja2g2668 697 MobiDBLite consensus disorder prediction 672 697 - -
Lja2g2668 697 Coils Coil 522 542 - -
Lja2g2668 697 SUPERFAMILY HSP90 C-terminal domain 541 663 IPR037196 -
Lja2g2668 697 Gene3D - 430 516 - -
Lja2g2668 697 Hamap Chaperone protein HtpG [htpG]. 2 664 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Lja2g2668 697 Coils Coil 227 256 - -
Lja2g2668 697 PANTHER HEAT SHOCK PROTEIN 90-1 1 696 - -
Lja2g2668 697 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 5 213 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2668 Lja-Chr2 37577215 37580595 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2668 K04079 - gmx:100811234 1212.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2668 2 37577215 37580595 Lja5g0667 5 6016698 6019242 ECH
Lja2g2668 2 37577215 37580595 Lja2g2668 2 37577215 37580595 ECH