Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0636 ATGCATAATCAACACACGCTCTTACTCAGATTCCCCACATTGCCCTCTCCCTCTGTCATCGTCCTTCATCTCACAGAGGCAAAGCTCAGCTTCAACACGAGAAGAATACACACTGCGAGAACCTTCTTCAGAAGAAGCAACTGGGTTCTCCCCAAGGCAATGTCTACTAGCTCTTCCTTCAGCTCTCGCTTTGGTGGCGGCGATGATGACACCACCACCACCACCACCAACAACAACAACAACAACAACAATAACGGTGCTTCTTTCCGCAACTTCAAGCTGAACGAGTCAACATTCTTGGCTTCGCTCATGCCCAAGACAGAGATTGGCGTTGACCGGTTTCTCCATTCTCACCCATACTATGATGGACGCGGTGCTCTCATCGCTATCTTCGATTCTGGTGTAGACCCGGCTGCTACGGGATTACAGGTTACCTCAGATGGGAAGCCGAAAATTCTTGATATTCTTGATTGCACTGGGAGCGGTGATATTGATACCTCAAAGGTGGTGAACGCAGATGCTGATGGTTGTATTTCTGGGGCATCAGGGGCATCTTTGGTTATCAATACTTCATGGAAAAATCCTTCTTGTGAATGGCATGTGGGTTATAAATTGGTTTATGAGCTCTTCACTGAAAAATTAACTTCTCGTATGAAGAAAGAAAGAAGGAAAAAGTGGGACAAGAAAAACCAGGAGGAAATTGCTAAGGCTGTAAAACAACTTAATGATTTTGATCAGCAACACATGAAGGTGGAGAATGTTAAACTCAAAAAGGCTCGCGGAGATCTACAGAGTAGGCTTGATCTTCTTAAAAAGCAATTTGAGAGCTATGATGATAAGGGGCCTGCCATAGATGCTGTCGTCTGGTATGATGGAGAAGTTTGGAGGGTTGCTCTTGACACACAGAGTCTTCAGGATGATCCAGATTGTGGGAAGCTTGCTAACTTTGTACCCTTAACTAACTATAGGACAGAGAGGAAGTATGGTGTCTTCAGCAAACTAGATGCTTGTACATTTGTTGTGAATGTCTATAATGATGGGAATGTCTTAAGTATTGTAACAGACAGCTCTCCTCACGGCACCCATGTTGCTGGTATAGCTACTGCATTCCACCCAGAGGAACCTTTGTTAAATGGAGTTGCACCTGGAGCACAATTAATTTCTTGTAAAATTGGGGACTCTCGCTTAGGTTCAATGGAAACTGGAACTGGTTTGACTCGGGCATTGATAGCTGCTGTTGAGCATAAATGCGACCTTATCAACATGAGTTATGGTGAGCCAACACTACTGCCAGACTATGGACGCTTTGTTGACCTTGTGAACGAAGCAGTAAACAAGCACCGTCTGATATTTGTGAGCAGTGCTGGTAATAGTGGGCCAGCATTGAGCACTGTTGGTGCACCTGGCGGTACATCTTCAAGTATCATAGGTGTTGGCGCTTATGTTTCTCCTGCTATGGCAGCAGGTGCTCACTGTGTTGTTGAACCTCCTTCTGAAGGGCTTGAATACACTTGGTCTAGCCGAGGACCAACAGCTGATGGAGATCTTGGTGTCTGTGTGAGTGCTCCTGGTGGTGCTATTGCTTCTGTCCCTACTTGGACTCTTCAACGGCGCATGCTCATGAATGGGACATCAATGGCATCTCCGTCAGCTTGTGGTGGAATTGCATTGCTCATAAGTGCAATGAAGGCTGAAGGAATTCCTGTGAGTCCATATATTGTGAGGAAGGCCCTTGAGAATACATCTGTTCCCATAGGCAATTCACCTGAGGATAAATTATCTACTGGGCAAGGGCTGATGCAAGTTGACAAGTGTTATGAATATATACAGCAGTCTCAAAATATTCCATATGTTTGGTATCAAATAAACGTCAAGCAATCTGGAAAATCAAATCCTTCATCACGGGGCATCTACTTGAGAGAGGCTGCTGCTTGCCAACAAGCTACTGAGTGGATGGTGCAAGTTGATCCAATATTTCACGAAGATGCCGACAAGTTTGAAGAATTAGTTGTGTTTGAGGAGTGCATTGAGTTACACTCATCAGATAGGACAGTAATTAAAGCCCCCGAGTATCTACTGCTCACTCACAATGGTCGTACCTTCAACATATTAGTGGATCCTACCAATTTATGTGATGGTCTGCATTATTATGAGGTCTATGGTATTGACTGCAAAGCACCATGGCGTGGCCCTCTTTTCAGAATTCCAATTACTATAACCAAGCCTATGGCTCTTACTAACAGATCTCCACAAGTTTCATTTTCAAAGATGTTATTCCAGCCAGGCCATATAGAAAGGAAATACATAGAAGTGCCACATGGTGCATCTTGGGTTGAAGCAACCATAAACGCATCCAGTTTTGATACTGCTCGAAGATTTTTTGTGGACGCAGTTCAGATATGTCCACTGCAAAGACCTTTTAAATGGAGGAATGTGATATCCTTTTCATCCCCGGCTGCCAAAAGCTTCACCTTTAGGGTAATAGGTGGTCAGACATTGGAACTAGTCATAGCTCAGCTTTGGTCAAGTGGAATCGGGAGTCATGAGACTACCAATGTGGATCTTGAGGTTGTGTTTCATGGTGTACAAGTCAATCAAGAGGAAATTGTACTTGATGGGAGTGAAGCCCCACTCAGAATTGATGCTGAAGCACTACTGGCATCTGAGAAACTTGCTCCTGTAGCAATTCTAAATAAGATAAGGATCCCATATCGACCAATAGATGCTAAGATTAGTTCACTTTCAACTGATCGTGACAAACTCCCCTCTGGAAAGCAGATACTTGCATTGACATTAACATACAAGATCAAATTGGAAGATGGAGCTGAAATCAAACCTCAAATACCATTTCTAAATGGTCGGATGTATGATACTAAATTTGAGTCTCAATTTTATATGATTTCTGATTCAAATAAGAAAGTACATTCAAGTGGAGATGCCTATCCGAACCCTACAAAACTTCCCAAGGGCGAATATAATTTACAGTTATATTTGAGGCATGACAACTTGCAGATTTTGGAAAAGTTGAAGCAGCTAGTGTTATTCATTGAGCGAAATTTGGAAGAGAAGGACATCATTAGGTTGTGCTTTTTCTCTCAACCAGATGGTCCACTGATAGGAAATGGTTCCTTTAAGTCTTCGACATTAATTCCAGGGATAAAAGAAGGCTTTTATCTTGGCCCACCACCAAAAGACAAGCTTCCCAAGAACTCTCCACAAGGATCTGTATTGGTGGGATCTATATCATATGGGAAACTATCATTAGCCAGTCACGGGGAGCATAAAAATCCAGAAAAGCACCCTGTATCATATCGGATTTCTTATATAGTTCCGCCAAATAAGATTGATGAGGACAAGGGAAAAACTTCCTCCTCATCTCCCAAGAAGACAGTTTCTGAACGTTTAGAAGAAGAGGTACGAGATGCAAAAATAAAAGTGATTGGAGGTCTAAAACCAGAAAGTGATGAAGAGTTCTTGGAATGGAATAAATTGTCTGCCTTACTCAAAACTGAATATCCAAAGTACACTCCGTTGCTTGTGAAGATTTTAGAAGGTTTAGTTTCTAGGAGTAATATCAAGGACAAGTTCCATCATGATGAAGAGGTAATTGATGCAGCAAATGAGGTGATCGACAGTATAGATAGAGAAGAGTTAGCAAGATTTTTCGCACTAAAAAATGATCCTGAAGATGAGGATGCAGAGAAAATCAAGAAAAAGATGGAATCAACCAGGGATCAGTTAGCGGTTGCACTTTATCAAAAGGGGCTTGCACTGGCAGAAATTGAGTCTTTAAAGGTAGATGATTCCCTGGATTCGGCGGCAACAGAAGGTGCAAAACAAGATGTAGAAAAAACTGACGAGAAATCCAAGGATGATGGTGATCCAGATATGTTTGAAGAGAACTTTAATGAACTGAAGAAATGGGTTGATGTTAAGTGCACAAAATATGGAACCCTCTTGGTCACAAACGAGAGGCGTAGTAAAAGGCTTGGGACTGCATTGAAGGTACTGACTGACATAATTCAAGAAGATACCGGGCCAGCGAAGAAGAAAATGTATGAACTAAAACTCTCTTTGGTTGAGGAAATTGGATGGACTCATTTGGCTACATATGAGAGACAGTGGATGCTTGTGCGTTTCCCCCCTAACTTGCCCCTTTTCTAG 4164 0.4253 MHNQHTLLLRFPTLPSPSVIVLHLTEAKLSFNTRRIHTARTFFRRSNWVLPKAMSTSSSFSSRFGGGDDDTTTTTTNNNNNNNNNGASFRNFKLNESTFLASLMPKTEIGVDRFLHSHPYYDGRGALIAIFDSGVDPAATGLQVTSDGKPKILDILDCTGSGDIDTSKVVNADADGCISGASGASLVINTSWKNPSCEWHVGYKLVYELFTEKLTSRMKKERRKKWDKKNQEEIAKAVKQLNDFDQQHMKVENVKLKKARGDLQSRLDLLKKQFESYDDKGPAIDAVVWYDGEVWRVALDTQSLQDDPDCGKLANFVPLTNYRTERKYGVFSKLDACTFVVNVYNDGNVLSIVTDSSPHGTHVAGIATAFHPEEPLLNGVAPGAQLISCKIGDSRLGSMETGTGLTRALIAAVEHKCDLINMSYGEPTLLPDYGRFVDLVNEAVNKHRLIFVSSAGNSGPALSTVGAPGGTSSSIIGVGAYVSPAMAAGAHCVVEPPSEGLEYTWSSRGPTADGDLGVCVSAPGGAIASVPTWTLQRRMLMNGTSMASPSACGGIALLISAMKAEGIPVSPYIVRKALENTSVPIGNSPEDKLSTGQGLMQVDKCYEYIQQSQNIPYVWYQINVKQSGKSNPSSRGIYLREAAACQQATEWMVQVDPIFHEDADKFEELVVFEECIELHSSDRTVIKAPEYLLLTHNGRTFNILVDPTNLCDGLHYYEVYGIDCKAPWRGPLFRIPITITKPMALTNRSPQVSFSKMLFQPGHIERKYIEVPHGASWVEATINASSFDTARRFFVDAVQICPLQRPFKWRNVISFSSPAAKSFTFRVIGGQTLELVIAQLWSSGIGSHETTNVDLEVVFHGVQVNQEEIVLDGSEAPLRIDAEALLASEKLAPVAILNKIRIPYRPIDAKISSLSTDRDKLPSGKQILALTLTYKIKLEDGAEIKPQIPFLNGRMYDTKFESQFYMISDSNKKVHSSGDAYPNPTKLPKGEYNLQLYLRHDNLQILEKLKQLVLFIERNLEEKDIIRLCFFSQPDGPLIGNGSFKSSTLIPGIKEGFYLGPPPKDKLPKNSPQGSVLVGSISYGKLSLASHGEHKNPEKHPVSYRISYIVPPNKIDEDKGKTSSSSPKKTVSERLEEEVRDAKIKVIGGLKPESDEEFLEWNKLSALLKTEYPKYTPLLVKILEGLVSRSNIKDKFHHDEEVIDAANEVIDSIDREELARFFALKNDPEDEDAEKIKKKMESTRDQLAVALYQKGLALAEIESLKVDDSLDSAATEGAKQDVEKTDEKSKDDGDPDMFEENFNELKKWVDVKCTKYGTLLVTNERRSKRLGTALKVLTDIIQEDTGPAKKKMYELKLSLVEEIGWTHLATYERQWMLVRFPPNLPLF* 1388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0636 1387 PANTHER PEPTIDASE S8 74 1279 - -
Lja5g0636 1387 MobiDBLite consensus disorder prediction 56 89 - -
Lja5g0636 1387 PRINTS Subtilisin serine protease family (S8) signature 123 142 IPR015500 -
Lja5g0636 1387 PRINTS Subtilisin serine protease family (S8) signature 542 558 IPR015500 -
Lja5g0636 1387 PRINTS Subtilisin serine protease family (S8) signature 355 368 IPR015500 -
Lja5g0636 1387 Gene3D - 167 239 - -
Lja5g0636 1387 Gene3D - 619 754 - -
Lja5g0636 1387 Gene3D - 1129 1387 - -
Lja5g0636 1387 PANTHER TRIPEPTIDYL PEPTIDASE II 74 1279 - -
Lja5g0636 1387 Pfam Subtilase family 123 595 IPR000209 GO:0006508|GO:0008236
Lja5g0636 1387 SUPERFAMILY Subtilisin-like 109 616 IPR036852 GO:0004252|GO:0006508
Lja5g0636 1387 Pfam Tripeptidyl peptidase II 886 1070 IPR022229 -
Lja5g0636 1387 Gene3D Peptidase S8/S53 domain 284 617 IPR036852 GO:0004252|GO:0006508
Lja5g0636 1387 ProSitePatterns Serine proteases, subtilase family, histidine active site. 359 369 IPR022398 -
Lja5g0636 1387 Coils Coil 253 273 - -
Lja5g0636 1387 ProSiteProfiles Serine proteases, subtilase domain profile. 108 606 - -
Lja5g0636 1387 MobiDBLite consensus disorder prediction 1275 1296 - -
Lja5g0636 1387 MobiDBLite consensus disorder prediction 1113 1135 - -
Lja5g0636 1387 CDD Peptidases_S8_Tripeptidyl_Aminopeptidase_II 103 585 IPR034051 GO:0006508|GO:0008240
Lja5g0636 1387 ProSitePatterns Serine proteases, subtilase family, serine active site. 543 553 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0636 Lja-Chr5 5678465 5696903 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0636 K01280 - gmx:100787184 2354.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0636 5 5678465 5696903 Lja5g0636 5 5678465 5696903 ECH
Lja2g2623 2 35996861 36017662 Lja5g0636 5 5678465 5696903 PCT