Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2623 ATGCCTTGCTCTTCCTTCAGTACTGGCGGCGATAACGGCGGCGATAACAGCGGCAAGAAAAGCGATGGTTCTTCTCTCCGTAATTTCAAGCTGAACGAGTCAACCTTCTTGGCTTCACTCATGCCGAAGAAAGAAATCGCCGCAGATCGATTCATCGACGCTCACCCTACCTACGATGGCCGCGGTGCTCTCATCGCTATCTTCGATTCTGGTGTAGACCCGGCTGCGGATGGATTACAGATTACCTCGGACGGGAAACCGAAAATTCTTGATGTCATTGATTGCACCGGGAGCGGAGATGTTGATACCTCAAAGGTGGTGAAGGCTGATGCTGATGGTTGTATTAGTGGGGCATCTGGGGCATCTCTGGTTATCAATACTTCGTGGAAAAATCCTTCTGGTGAATGGCATGTGGGCTATAAATTGGTTTATGAGCTCTTTACAGAAACATTGACTTCTCGTTTGAAGAAAGAAAGAAAGAAAAAGTGGGATGAGAAAAACCAGGAGGATATTGCAAGGGCTGTTAAACAGCTTAATGATTTTGATAAGCAACACATCAAGGTGGATGATGCGAAACTTAAAAGGGTTCGTGAAGATCTCCAGAATAGGCTTGATCTTCTGAGAAGGCTTTCTGAGAGCTATGATGATAAAGGGCCAGCTATAGATGCTGTTGTCTGGCATGACGGAGAGGTCTGGAGAGTTGCTCTTGACACACAAAGTCTTGAGGATGATCCTGATTGTGGGAAGCTTGCCAATTTTGTGCCTTTAACTAATTATAGGATTGAGAGGAAGCATGGCGTCTTCAGCAAATTAGATGCTTGTACATTTGTTGTTAATGTGTATAATGATGGAAATGTCTTAAGTGTTGTAACAGACTGTTCTCCCCATGCCACCCATGTTGCCGGTATAGCTAGTGCTTTCCACCCGAAGGAGCCCTCACTGAATGGAGTTGCACCTGGCGCACAATTAATATCTTGCAAAATTGGCGATTCTCGCTTAGGTTCAATGGAAACTGGAACTGGTTTGACTCGGGCACTGATAGCTGCTGTGGAGCATAAATGCGATCTTATCAACATGAGTTATGGTGAAGCAACATTACTGCCAGACTATGGACGCTTCATTGACCTAGTGAATGAAGCGGTGAACAAGCACCGTCTGATATTTGTGAGCAGTGCTGGTAATAGTGGGCCAGGATTGAGCACTGTCGGTGCACCCGGCGGTACAGCTTCGAGTATTATAGGAGTTGGTGCATATGTTTCTCCTGCTATGGCTGCTGGTGCTCATTGTGTTGTTGAACCTCCATCTGAGGGGCTTGAATACACATGGTCGAGCCGAGGACCAACAGCTGATGGAGACCTTGGTGTTTGTATAAGTGCTCCTGGTGGTGCTGTTGCTCCTGTTCCTACATGGACTCTTCAACGACGTATGCTGATGAATGGGACATCTATGGCATCACCTTCAGCCTGTGGAGGAATAGCATTGCTCATAAGTGCAATGAAGGCTGAAGGAATTGCTGTGAGTCCATATAGTGTGAGGAAGGCTCTTGAGAATACGTCAGTTCCCATAGGTGATTTACCTGAGGATAAGCTATCCACTGGACAAGGGCTTATGCAAGTTGACAAGGCTTTCGAATATATACAGAAGTGTCAAAATATTCCATGTGTTTGGTATCAAATAAACATCAATCAATCGGGAAAAACAAATCCTTCATCAAGGGGCATCTACCTTAGAGAGCCTAGTGCTTGTCGACAATCGACTGAGTGGACAGTGCAAGTTAGTCCCAAATTTCATGAAGATGCCAGCAACTTTGAGGAATTGATTCCATTTGAGGAGTGCATTGAGTTACAATCTACTGGAGAGACCATTGTGAAGGTCCCTGACTATCTATTGCTTACTCATAATGGTCGCACCTTCAATGTAGTTGTAGATCCTTCCAATCTATGTGATGGTCTTCATTATTATGAGGTCTATGGTATTGACTGCAAAGCTCCATGGCGTGGTCCTCTTTTCAGAATTCCAATTACCATAACAAAGGCCAAGGCTGTAACTAACCAGCCTCCACAAGTTTCATTTTCAAATATGTTATTTCAACCAGGCCATATAGAAAGGAGATACATAGAAGTGCCACATGGTGCGTCTTGGGCTGAAGCAACAATGAAAACATCAGGATTTGACACAGCTCGAAGATTTTATTTGGACGCTGTTCAGATGTGCCCATTGCAAAGACCTTTGAAATGGGAGAGTGTTGCAACGTTTCCTTCCCCTGCTTCCAAAAGCTTTGCCTTTAGGGTAGTAAGTGGTCAGACATTGGAATTAGTCATTGCTCAGTTTTGGTCAAGCGGCATAGGAAGTCATGATACTGCCAGTGTGGATTTTGAGGTTGCGTTTCATGGGATAAAAGTCAACCAAGAAGTCATACTTGATGGTAGTGAGGCGCCAGTCAGACTTGATGCTGAAACACTACTGGGGTCTGAGGAACTTGTGCCTGTGGCTATTCTAAACAAGATTAAGGTCCCATATCGACCAATAGATTCTAAGATTAGTGCACTTTCAACAGATCGTGACAAGCTGCCCTCTGGAAAGCAGATACTAGCACTGACTTTGACGTACAAGATTAAATTGGAAGATGGAGCAAAAGTGAAACCTCAAATACCATTACTAAATAACCGGATATATGACACTAAATTTGAGTCTCAGTTCTTTATGATTTCTGACTCAAATAAGCGCGTATATTCATGTGGAGATGTCTATCCAAGCTCTTCTAATCTTCCCAAAGGAGAATATAATTTACAGCTATACTTGAGGCATGACAATGTGCAGATTTTGGAAAAGATGAGGCATTTGGTGTTATTCATTGAGCGGAATTTGGAAGAGAAGGATGTTATTCGGTTAAGCTTTTTCTCTCAACCTGATGGCCCACTGATGGGAAATGGTTCCTTCAAGTCCTCAATGTTATTTCCAGGAATTAAAGAAGGACTATATCTTGGTCCACCACCAAAAGAAAAGCTTCCCAAGAATTCTCCACTAGGATCTGTTTTGGTAGGGGCAATTTCATATGGGAAACTATCACTTGCTGATCAAGGGGAGAGTAAAAATCCAGAAAAGCACCCTGCAGCGTGTTCGATTACTTATATAGTTCCCCCAAATAAGGTCGATGAGGACAAGGGAAAAGGTTCTTCCTTATCTTCCAAGAAGGCTGTGTCTGACCGTATAAAAGAAGAGGTAAGGGATGCAAAAATAAAAGTTCTGGGAAGCCTAAAACAAGAAACTGATGAAGAGCGTGTGGAGTGGAAAGAGCTATCTGCCTTGCTTAAATCAGAATATCCAAAGCACACTCCATTGCTTGCAAAGATTTTGGAAGGTTTAGTTTCTAGGAGTAATATCAAAGACAAAATTCAACACGATGAAGAGGTGATCGATGCAGCCAATGATGTGATTGACAGTATTGACTGCGAAGAGTTAGCCAAATTCTTTGCACTAAAAAATGATCCAGAAGATGAGGAAGCAGAGAATATCAAGAAAAAGTTTGAGTCAGCTCGAGACCAGTTAGCAGAGGCACTTTACCAGAAGGGGCTTGCGCTGGCAGAGATCGAGTCTTTAAAGTTGGCAGACTTGACTTGGTGTATATTGTCAAAGGACGTAGATAAGTTCTTGGCTTTGGAGGCGGGGACAGGAGGTGCAAGAAAAGATGTGGACAATGAGCAATCTACAGATGATGGCAGCCATCCAGATTCGTTCGAAGAGAATTTTCAAGAACTGAGGAAATGGGTTGATGTAAAGTCACCTAAATATGGAATCCTCTTAGTAACACGCGAGAGGCGTTCTCAAAGGCTTGGGACAGCGTTAAAGGTACTGTGTGACATAATTCAAGATGATGCAGAGCCTGCCAAGAAGAAATTCTATGAACTAAAGCTCTCTTTGCTTGATGAGATTGGATGGACACATTTAGCAACTTATGAGAGACAATGGATGCTTGTGCGTTTCCCTCCAAGCTTGCCCCTTTTCTAG 4008 0.4349 MPCSSFSTGGDNGGDNSGKKSDGSSLRNFKLNESTFLASLMPKKEIAADRFIDAHPTYDGRGALIAIFDSGVDPAADGLQITSDGKPKILDVIDCTGSGDVDTSKVVKADADGCISGASGASLVINTSWKNPSGEWHVGYKLVYELFTETLTSRLKKERKKKWDEKNQEDIARAVKQLNDFDKQHIKVDDAKLKRVREDLQNRLDLLRRLSESYDDKGPAIDAVVWHDGEVWRVALDTQSLEDDPDCGKLANFVPLTNYRIERKHGVFSKLDACTFVVNVYNDGNVLSVVTDCSPHATHVAGIASAFHPKEPSLNGVAPGAQLISCKIGDSRLGSMETGTGLTRALIAAVEHKCDLINMSYGEATLLPDYGRFIDLVNEAVNKHRLIFVSSAGNSGPGLSTVGAPGGTASSIIGVGAYVSPAMAAGAHCVVEPPSEGLEYTWSSRGPTADGDLGVCISAPGGAVAPVPTWTLQRRMLMNGTSMASPSACGGIALLISAMKAEGIAVSPYSVRKALENTSVPIGDLPEDKLSTGQGLMQVDKAFEYIQKCQNIPCVWYQININQSGKTNPSSRGIYLREPSACRQSTEWTVQVSPKFHEDASNFEELIPFEECIELQSTGETIVKVPDYLLLTHNGRTFNVVVDPSNLCDGLHYYEVYGIDCKAPWRGPLFRIPITITKAKAVTNQPPQVSFSNMLFQPGHIERRYIEVPHGASWAEATMKTSGFDTARRFYLDAVQMCPLQRPLKWESVATFPSPASKSFAFRVVSGQTLELVIAQFWSSGIGSHDTASVDFEVAFHGIKVNQEVILDGSEAPVRLDAETLLGSEELVPVAILNKIKVPYRPIDSKISALSTDRDKLPSGKQILALTLTYKIKLEDGAKVKPQIPLLNNRIYDTKFESQFFMISDSNKRVYSCGDVYPSSSNLPKGEYNLQLYLRHDNVQILEKMRHLVLFIERNLEEKDVIRLSFFSQPDGPLMGNGSFKSSMLFPGIKEGLYLGPPPKEKLPKNSPLGSVLVGAISYGKLSLADQGESKNPEKHPAACSITYIVPPNKVDEDKGKGSSLSSKKAVSDRIKEEVRDAKIKVLGSLKQETDEERVEWKELSALLKSEYPKHTPLLAKILEGLVSRSNIKDKIQHDEEVIDAANDVIDSIDCEELAKFFALKNDPEDEEAENIKKKFESARDQLAEALYQKGLALAEIESLKLADLTWCILSKDVDKFLALEAGTGGARKDVDNEQSTDDGSHPDSFEENFQELRKWVDVKSPKYGILLVTRERRSQRLGTALKVLCDIIQDDAEPAKKKFYELKLSLLDEIGWTHLATYERQWMLVRFPPSLPLF* 1336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2623 1335 PANTHER PEPTIDASE S8 11 1218 - -
Lja2g2623 1335 Gene3D Peptidase S8/S53 domain 43 137 IPR036852 GO:0004252|GO:0006508
Lja2g2623 1335 Gene3D Peptidase S8/S53 domain 227 553 IPR036852 GO:0004252|GO:0006508
Lja2g2623 1335 ProSitePatterns Serine proteases, subtilase family, serine active site. 480 490 IPR023828 -
Lja2g2623 1335 ProSiteProfiles Serine proteases, subtilase domain profile. 43 543 - -
Lja2g2623 1335 Gene3D - 556 690 - -
Lja2g2623 1335 Coils Coil 190 217 - -
Lja2g2623 1335 Coils Coil 1169 1189 - -
Lja2g2623 1335 Gene3D - 1066 1335 - -
Lja2g2623 1335 Pfam Tripeptidyl peptidase II 822 1006 IPR022229 -
Lja2g2623 1335 Gene3D - 158 216 - -
Lja2g2623 1335 PANTHER TRIPEPTIDYL PEPTIDASE II 11 1218 - -
Lja2g2623 1335 MobiDBLite consensus disorder prediction 1 26 - -
Lja2g2623 1335 CDD Peptidases_S8_Tripeptidyl_Aminopeptidase_II 40 522 IPR034051 GO:0006508|GO:0008240
Lja2g2623 1335 SUPERFAMILY Subtilisin-like 48 554 IPR036852 GO:0004252|GO:0006508
Lja2g2623 1335 PRINTS Subtilisin serine protease family (S8) signature 60 79 IPR015500 -
Lja2g2623 1335 PRINTS Subtilisin serine protease family (S8) signature 292 305 IPR015500 -
Lja2g2623 1335 PRINTS Subtilisin serine protease family (S8) signature 479 495 IPR015500 -
Lja2g2623 1335 Pfam Subtilase family 60 519 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2623 Lja-Chr2 35996861 36017662 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2623 K01280 - gmx:100798235 2294.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2623 2 35996861 36017662 Lja2g2623 2 35996861 36017662 ECH
Lja2g2623 2 35996861 36017662 Lja5g0636 5 5678465 5696903 PCT