Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g4353 ATGACAAGCGTCAGAAAGTCGGATTCTCCAAGGGGAGAGGTTGGAGAGATTGACACAAGGGCACCATTCCAATCAGTCAAAGCTGCTGTTACCTTATTTGGTGAAGTAGCTGTCTCTAGGGACAGATATGCTGTCAAGAGAAGGTCATCTGAGAGTGTATTTGAAAAGGAAACACAGCTTATCTTGACCCAAAGAGAATTGAACAAGATAAAGAAACAGGTGGACAGTGCTGAAGCCACCAAAGCTAAAGCCCTTTCTGAACTTGAGAATGCCACAGAGATCCTTCAGAACTTGATAACCAAGCTCGCCAATGTGAGAGAATCTAAGCAATCGGCAATGGAAGCAGTTGAAATTGTGAGGAATCAGAGCAAAGAATTTGAGAAGACATTATCCTTTAAAGCTATAGGATATGAAGCTTGGAAACAAGAACTAGAACATGCAAGAAAAGAGTACACAGCTACTGTAACTGAACTAGATTCTTGCAAGCAAGAACTCAACAAAATCAGGCAGGATTTTGATGCAGCTTTGGAGGCAAAGATGGCAGCATTCCAGACAGCAGCAGAAGCTCAGCGCTCGGCGAAATTAAACTCTGAAAGGATCAGTGAACTCTCAAAGGAAATTGCAGACATGAAAGCATCAATTGAACAATTGAATGAAGCTCAAGTTGATTTTTACAGAACTGCTAAGGGAGAAGCACAGGAAAAGTTGGAGTCCTTAAAGAATGAATATGACCCCGAACTAGTCCAAAGTCTAGATGCCAAACTTGCTGAAACAAGTGCAGAGATTGAGGTTCTTCAAGAGCAGATGAGAAAGGTTCATGCTTCTCATATGGAATCTGTGAGACTTCTAACTTCAGAGCTTAAAGAAGCCACAAAGACCCTACAGGACGTTGCTGCAGAAGAAACCTCCCTTAAAAAACTAGTGTTTTGTCTTAGGACAGAATTAAGACAAGTGAAGAAGGAGCAAGATGAACTGAAGGAGAAGGAACAGGCTGCAGAGGCTCTTTCTGCTAACCTCACTGGTGAACTGCAAGAGAGCATGGAAGTTGCAAGGCCTCAGCCAGGCACCGTGGAGGATCTAGAAGCTAATATCTTTTACAAGCAGAGTATGAAACTCCAGAGGCTAAAATCCGAGACAGAAGATGCCAGAAGAGAAGCAGAAGAGACGAGCAGAAAAGCTCAAGGGCTGAAGCAAGAAGCAGAAAAATCCCGAGCAGCGGCAGAAGAAGCAGAGAAAAAACTTGAGCTTCTTCTGAAAGAGGCTAAAGCAGCAAAAGCAGCAAAGCAAAGAGCCATGAAGGAGATGAAGATTTTGTCTGACGTGCATAGTAGAGCCTCCAATCCAAAATTCGGTGGTAAGATCAAAATGTCAAGAGAAGAGTTTGAGTCACTTAGAGGAAAAGTCAAGGAATGTGAAGATTTGGTTGAAAAGAAAGAGGGAGCTGTCATGGCTGAGCTACAAGCAATCTACGCAAGAAAAAATGAACTACACAGAAAGGTGGAAGCTAATCTGAAAGCAATTGAGGAAACAAATGCTGCAACTGAGACTGCTTTGTGGTATACAGAAATGGCAGATTCTGCAAAAGTGGCAATTGAGAATGAACTTAAAAGATGGCGTCAACAAGAACAGGTGGTGGTGGCTAATGCATCTTCCCAGATATCGGTTCATCCTTCAAGACTAATCTCATTGAGAACCAAGAAGTGA 1704 0.4266 MTSVRKSDSPRGEVGEIDTRAPFQSVKAAVTLFGEVAVSRDRYAVKRRSSESVFEKETQLILTQRELNKIKKQVDSAEATKAKALSELENATEILQNLITKLANVRESKQSAMEAVEIVRNQSKEFEKTLSFKAIGYEAWKQELEHARKEYTATVTELDSCKQELNKIRQDFDAALEAKMAAFQTAAEAQRSAKLNSERISELSKEIADMKASIEQLNEAQVDFYRTAKGEAQEKLESLKNEYDPELVQSLDAKLAETSAEIEVLQEQMRKVHASHMESVRLLTSELKEATKTLQDVAAEETSLKKLVFCLRTELRQVKKEQDELKEKEQAAEALSANLTGELQESMEVARPQPGTVEDLEANIFYKQSMKLQRLKSETEDARREAEETSRKAQGLKQEAEKSRAAAEEAEKKLELLLKEAKAAKAAKQRAMKEMKILSDVHSRASNPKFGGKIKMSREEFESLRGKVKECEDLVEKKEGAVMAELQAIYARKNELHRKVEANLKAIEETNAATETALWYTEMADSAKVAIENELKRWRQQEQVVVANASSQISVHPSRLISLRTKK* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g4353 567 Coils Coil 222 242 - -
Lja4g4353 567 Coils Coil 483 517 - -
Lja4g4353 567 Gene3D - 119 280 - -
Lja4g4353 567 Coils Coil 369 438 - -
Lja4g4353 567 Coils Coil 137 178 - -
Lja4g4353 567 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 1 552 - -
Lja4g4353 567 Coils Coil 308 345 - -
Lja4g4353 567 PANTHER WEB FAMILY PLANT PROTEIN 1 552 - -
Lja4g4353 567 Coils Coil 60 115 - -
Lja4g4353 567 Coils Coil 280 300 - -
Lja4g4353 567 Coils Coil 200 220 - -
Lja4g4353 567 MobiDBLite consensus disorder prediction 375 405 - -
Lja4g4353 567 Coils Coil 248 275 - -
Lja4g4353 567 Pfam Weak chloroplast movement under blue light 232 542 IPR008545 -
Lja4g4353 567 Pfam Weak chloroplast movement under blue light 16 220 IPR008545 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g4353 Lja-Chr4 77074337 77076318 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g4353 - - gmx:100796853 702.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g4353 4 77074337 77076318 Lja6g2548 6 54283242 54285767 PCT