Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g4325 ATGGCTGATAATGATTCTATATCCCAATACCTCGCATCTGCAGTCGATGCTGCTCAGAAAGCTGGTGATGTTATTCGAAAAGGTTTCTATGAGACTAAGCATGTTCAGCTCAAGGGACAGGTTGATTTGGTCACTGAAACTGATAAAGCATGTGAAGACCTCATATTTAATCACCTCAAGCAACTTTACCCTGCTCATAAGTTCATTGGTGAAGAAACCTCAGCTGCTTTTGGCACTACAGAACTTACAGATGAACCCACATGGATAGTTGATCCTGTGGATGGAACTACAAATTTTGTTCATGGGTACCCCTTTGTTTGTGTATCCATTGGTCTTACAATTGGAAAAATTCCTACAATTGGTGTTGTTTACAACCCAATAATGAATGAGCTTTTCACTGGAATTCGCGGAAAGGGTGCTTTTCTGAATGGAGACCCTATAAAAGTATCATCACAAAGTGAACTAATCAACTCTCTTCTTGCATTTGAGTCTGGAGCAAAGTGCGATAAGTTAACCGTAGATACCTTTACAAACAGGGTTAATAGCTTGCTTTCCAAGGTGAGATCCATTCGAGTGCCTGGCTCTTGTGCATTGAACCTTTGTGGAATTGCATGTGGAAGGCTGGATGTACACGTTCAATTTGACTTTGGAGGTCCTTGGGATGTTACAGGTGGTGCTGTCATTGTTACAGAAGCTGGAGGCGTTGTATTTGATCCGTCTGGTGCAGATTTTGACATCACAGCTCAGCGAGTAGCAGCTTCCAACCCTTTCTTGAAGGATGCCCTTGTTGATGCTCTGCGCCAAACTGAGTGA 813 0.4268 MADNDSISQYLASAVDAAQKAGDVIRKGFYETKHVQLKGQVDLVTETDKACEDLIFNHLKQLYPAHKFIGEETSAAFGTTELTDEPTWIVDPVDGTTNFVHGYPFVCVSIGLTIGKIPTIGVVYNPIMNELFTGIRGKGAFLNGDPIKVSSQSELINSLLAFESGAKCDKLTVDTFTNRVNSLLSKVRSIRVPGSCALNLCGIACGRLDVHVQFDFGGPWDVTGGAVIVTEAGGVVFDPSGADFDITAQRVAASNPFLKDALVDALRQTE* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g4325 270 CDD IMPase 10 255 IPR033942 GO:0008934|GO:0046855
Lja4g4325 270 Gene3D - 1 146 - -
Lja4g4325 270 PANTHER INOSITOL MONOPHOSPHATASE 1 269 - -
Lja4g4325 270 ProSitePatterns Inositol monophosphatase family signature 1. 88 101 IPR020583 -
Lja4g4325 270 PRINTS Lithium-sensitive myo-inositol monophosphatase family signature 21 40 IPR020552 GO:0046854
Lja4g4325 270 PRINTS Lithium-sensitive myo-inositol monophosphatase family signature 139 157 IPR020552 GO:0046854
Lja4g4325 270 PANTHER INOSITOL MONOPHOSPHATASE 3 1 269 - -
Lja4g4325 270 Pfam Inositol monophosphatase family 9 268 IPR000760 GO:0046855
Lja4g4325 270 PRINTS Inositol monophosphatase superfamily signature 42 62 IPR000760 GO:0046855
Lja4g4325 270 PRINTS Inositol monophosphatase superfamily signature 64 80 IPR000760 GO:0046855
Lja4g4325 270 PRINTS Inositol monophosphatase superfamily signature 88 104 IPR000760 GO:0046855
Lja4g4325 270 PRINTS Inositol monophosphatase superfamily signature 137 160 IPR000760 GO:0046855
Lja4g4325 270 PRINTS Inositol monophosphatase superfamily signature 185 206 IPR000760 GO:0046855
Lja4g4325 270 PRINTS Inositol monophosphatase superfamily signature 217 241 IPR000760 GO:0046855
Lja4g4325 270 Gene3D - 148 270 - -
Lja4g4325 270 SUPERFAMILY Carbohydrate phosphatase 8 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g4325 Lja-Chr4 76811372 76815341 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g4325 K10047 - gmx:100817591 458.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g4325 4 76811372 76815341 Lja6g2500 6 53861846 53871792 PCT