Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3372 ATGAAGAACACAAACAACACCAACACAAAACTCATCCTCCTCCACCCATACATCCAAAAACAAGGAAGCTCCAACCGATTATGGCTTCTTGCTTTCATCTCAATTCTCACCCTCGCTTTCCTAGTGACTCTCATATACACCAGAGAATCCACCTTCATCACCACTTCAACAACTTCCTCTGTTATTCCCTCCCCTGTTTCTGGATTAGGCTCTGCACCATTACCAGCCACAGTGATCAACACGCTCCTCCACTATGCCGCGAAATCCAACGACACGTTCCACATGCCTTACTCCGACCTCAAACCCATATCTGATGTGCTCAGAAAGTGCTCTTCGCCGTGCAATCTTCTCATCTTCGGCCTCACCCACGAAACCCTCCTCTGGAAAGCCCTGAACCATAACGGCAGAACAGTGTTCATAGAAGAAAACCGCTACTATGCTGCATATTTTGAAGAAAAGCACCCTGGAATTGATGTCTTTGATGTTCAATACACAACCAAACGGAGCGAGATGAAGGAGCTCATAGCTTCAGCGAAAGAGCAAGTAGCGAATGAGTGTAAGCCGGTACAGAATTTGTTGTTTTCAGATTGCAAGCTTGGGCTCAATGATCTTCCCAACCATGTGTATGAGGTTGATTGGGATGTTATTTTGGTGGATGGGCCGCGTGGCGATTGGCCGGATGCTCCGGGAAGGATGTCAGCGATTTTCACCGCCGGCGTCCTAGCCAGGAGCAAGAAGGGCGGGAACCCAAAGACTCATGTGTTCTTGCATGAGTTCAATGGAGAAGTGCAACAGGTTTGTGGGAATGAGTTTCTTTGCAAGGAGAATTTGTTGGAGGGGAGTGAGAGTTTGGGACATTATGTGTTGGAGAGGATGGATGAGACGAGTGTTCATTATTGTAAGAATCACTCGTCGTCTTCGGGGCGAGGGAATTCTACATCTACTTAG 948 0.4757 MKNTNNTNTKLILLHPYIQKQGSSNRLWLLAFISILTLAFLVTLIYTRESTFITTSTTSSVIPSPVSGLGSAPLPATVINTLLHYAAKSNDTFHMPYSDLKPISDVLRKCSSPCNLLIFGLTHETLLWKALNHNGRTVFIEENRYYAAYFEEKHPGIDVFDVQYTTKRSEMKELIASAKEQVANECKPVQNLLFSDCKLGLNDLPNHVYEVDWDVILVDGPRGDWPDAPGRMSAIFTAGVLARSKKGGNPKTHVFLHEFNGEVQQVCGNEFLCKENLLEGSESLGHYVLERMDETSVHYCKNHSSSSGRGNSTST* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3372 315 Pfam Polysaccharide biosynthesis 100 286 IPR021148 -
Lja4g3372 315 PANTHER OS11G0490100 PROTEIN 1 305 IPR006514 GO:0045492
Lja4g3372 315 TIGRFAM A_thal_3515: uncharacterized plant-specific domain TIGR01627 74 300 IPR006514 GO:0045492
Lja4g3372 315 PANTHER PROTEIN IRREGULAR XYLEM 15 1 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3372 Lja-Chr4 63765796 63767175 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3372 - - gmx:100790865 535.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0312 2 2823897 2825313 Lja4g3372 4 63765796 63767175 ECH
Lja4g3372 4 63765796 63767175 Lja4g3372 4 63765796 63767175 ECH
Lja2g0312 2 2823897 2825313 Lja4g3372 4 63765796 63767175 PCT