Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3363 ATGGATCAAAAAACATGGCTTTGGAGGAAAAGATCCTCAGAAAAGACAATTGTAGCAACTGAAGACAACACTCACACTTCAAAAGACAATGGAGAGGTACAGGCACTTCTAACTGATAAAGAAGAATTGGAGAAAAACTTGACAGAATTGAATAATAAGCTTGCTTCGGCACTTTCTGACTGTGATGCTAAAGATGAGCTAGTGAAGAAACAAACGAAAATTGCACACGAAGCAGTCTCAGGTTGGGAGAAAACTGAAGATGAAGTGTTGTCTATGAAGCAATATCTGGATGAAGCTTTGCAGCAGAAATTAGTTTATGAAGAAAGAGTAGCCCATCTAGATGGAGCTCTGAAAGAATGTATGCAGCAGTTACGATTTGTTCGCGAAGAACAAGGACGAAGGATTCATGATGCTGTGATGACGGCTTCAAAAGAATTTGAAAAAGAGTACATGGTGTTGGAGGAGGAGTTATCTGAGACAAGTAAAAGGCTTGCAAAAGCTGAGATTGAGAATTCTCATCTAATCAACTCCAGTTTAGCAAAAGAAAATTTGATTAAAGATCTGAAAAGACAGCTTACTCAAGTTGAGGCAGATCATAGTGCTCTGGTGAATCGACTAGAGGCCACGGAGAAAGATAATGCTTCACTGAAGTATGAGGTTCGACTGCTTGAAAAGGAACTGGAGATCCGAAATGAGGAGAGAGAATTTAATCGTCGGACTGCTGATGCTTCTCACAAGCAACACTTAGAGAGTGCTAAAAAAATTGCCAAGTTAGAATCAGAATGTCAGAGGCTGCGCCTTCTGGTTCGGAAACGGTTACCGGGTCCTGCTGCCCTAGCAAAAATGAAAAATGAAGTTGAAATGATGGGACGAGATCCAGTTGAAATGATGAGAAACAAGTTGAACCCGACCAGTTTAATGGTTGAGTCTCTAGGTGACAGTTCTCCTAGGACTCCCAATAGAAGAACCAATACTTTGAATGGGCAACTATTTGCTTTGGAAGATAAAAACAAGGCTTTAAAAGAATCTCTGAATAGGAAAATGAATGAGCTCCAATTCTCAAGAGTAATGCTTTCTCGCACAGCTTCCAGACTTTTGCAACTTGAGTCACAAATTGAAGAATCATCTAAAGGTCCAGCAACTGTGGAGCAGCCTAGAAGTAACCTAATACAGCACGAGCTCTCATTGGCATCAATGTCTGATGTTGGCAGTGATGACAAGGTTAGCTGTGCTGAATCCTGGGCTTCTGCATTGATTTCAGAATTGGAGCATTCCAGAGGTGGAAAACCGAAGGAGTCGTTGTCATCATGCAAAAGTGTGGGAGCATCAGACATAAACCTTATGGATGACTTTGTTGAAATGGAAAAATTAGCAGTGGTCTCCGTTGAAAAAGCCTCTGAAATCTCGTGTGCATCTCCGAAAGCCGTTAGTGAGAGCAATGGCTTCTCAGAGACTGGGACAAATGATACTGCCTCAGAAGTAATCGGTAAGGCGATCATTCCTGTGTCTGGTGGCGTTTCAGACTTCTCTATGTCAAATCAGAAAACCTGTTCCATTGACATACCTAAGGGTAACATTCCCAGTTGGCTTCAAGATGTAGTGAAAATGGTCTTGGAACAGAACCATGTCACTCATAAAAACCCTGATGATATACTCGAGAATATTAGAGTAGCTTTGAGGTATCTGAATAATCCGGATCCGTCTGGGTTTGATTTAAGCAAAGACTTGGGTCATATAGATGCACCTGATCCTCCCCATTGTATTCACTGCATCTCCTCCAAACCTTCAAATAATTCTGTAGTGGTAGATCTATCCAATGATATAAATAATGGTGGCCTCTCATCAGTAAAAGGAACCAAACAGCAGTCTCAGGTTGATCTGAGTAAATCAATAGGAAAGATAATTGAGCTTATTGAAAGAATCAGCCTGCCTGTTGTAGATTATGATAATTCGGATCCCGTGTGCACAAGTGACGGGAATACCTTTTCATATAAGAATCTAGGAATGCCAACAGACTACATGGTCCGCGTTTTCCAGTGGAAAACATCAGAGATCAGTAATGTTCTGCAACAGTTTCTACATGTGTGTTATGATTTAATGAACAGCAAGGCTGATCTTGAAAAATTTGCCAAAGAACTAACAACGGCTTTGGATTGGATTATGAATCACTGCTTTTCACTTCAGGATGTTTCTAGTATGAGGGATACCATCAAGAAACAATTTGATTGGGATGAGACACGAAGTGAAAGTGAAGTGGAGTTCGGGATGGTAAGTCCTCTTCCAGAGATATATAGGTTGAATCATCCCAGAGAACATTTGCTCTGTCGGCCTCAAGTAACTGTTTCGGATGGTCATGATCTTCAGACTGGAGAGATGTATTATGATGAAAAAGAAGAATTGAAAAATATGAAAGATAAGTTGATCGATGCTGAATCTCAGAAGAAAGTCTTAGAAGGAAGGCTTCAAACAACTACTGATAGGGTTGAATCCTTAATGGATCAACTTCGGGAATCAGAAAAAACTATTGAGAGCTTGAGACTAGAGTTGCAATCATTAAAAGAATCAAATGGAATACTTGAGGATGATATGGCAAATCAGAAATTGATAAATTCTGATCTTGATGCACAGTATACAGAAGCTGAATTAAAAGAGGCTCATCACAAGGTTTTGGCATTAGAAGTGGAACTGGAGAACAAGAGCCACTGTTATGAAGATTTAGAGGCCAGATGTCTTGAATTGCAGCTCCAGCTTGAAAGCATGTCAAAGGATTGCCCAAACCATGGTATTAACCAGAAAGATAAGCCACTGCGTACTGACATGGAGATCACAGCTGCTTCAGAAAAGTTGGCAGAGTGTCAAGAAACCATCCTTAACCTTGGCAAGCAGTTGAAGGCATTAGCTACCCCAAAGGATGCATCCCTTATTGACAAAGCAATTGCCACGCAACGGAGTACAATTTCCCACACAACCCCCACCAAGAACGTCGATCCAAATCCTGCCGCCCCAAAATTTATGAAAATGAAGAACCGGTCCCTGCTTGATCAGATGCTGGCTGAAGATGATACTAAAGGCAATGTTTCCAAAGCAAGTGATGGAAACTTCAATCCCACCACCATTCCTGGTATTATAGAGCCCCTGGAAAAGATTTTATCTTTGAACAAAGTTAATAAAGACCAGGATGACAGCGCTTCTGTTAATTCTTTGGCCATTGTACCAGCTAAGAAGGGAAGTTTGTGGAAGAAGTTATTATGGAAAAAGAAGAAAAGCGACAACCTGAAAACACCACTTCCGAAGAACACTTGA 3303 0.4084 MDQKTWLWRKRSSEKTIVATEDNTHTSKDNGEVQALLTDKEELEKNLTELNNKLASALSDCDAKDELVKKQTKIAHEAVSGWEKTEDEVLSMKQYLDEALQQKLVYEERVAHLDGALKECMQQLRFVREEQGRRIHDAVMTASKEFEKEYMVLEEELSETSKRLAKAEIENSHLINSSLAKENLIKDLKRQLTQVEADHSALVNRLEATEKDNASLKYEVRLLEKELEIRNEEREFNRRTADASHKQHLESAKKIAKLESECQRLRLLVRKRLPGPAALAKMKNEVEMMGRDPVEMMRNKLNPTSLMVESLGDSSPRTPNRRTNTLNGQLFALEDKNKALKESLNRKMNELQFSRVMLSRTASRLLQLESQIEESSKGPATVEQPRSNLIQHELSLASMSDVGSDDKVSCAESWASALISELEHSRGGKPKESLSSCKSVGASDINLMDDFVEMEKLAVVSVEKASEISCASPKAVSESNGFSETGTNDTASEVIGKAIIPVSGGVSDFSMSNQKTCSIDIPKGNIPSWLQDVVKMVLEQNHVTHKNPDDILENIRVALRYLNNPDPSGFDLSKDLGHIDAPDPPHCIHCISSKPSNNSVVVDLSNDINNGGLSSVKGTKQQSQVDLSKSIGKIIELIERISLPVVDYDNSDPVCTSDGNTFSYKNLGMPTDYMVRVFQWKTSEISNVLQQFLHVCYDLMNSKADLEKFAKELTTALDWIMNHCFSLQDVSSMRDTIKKQFDWDETRSESEVEFGMVSPLPEIYRLNHPREHLLCRPQVTVSDGHDLQTGEMYYDEKEELKNMKDKLIDAESQKKVLEGRLQTTTDRVESLMDQLRESEKTIESLRLELQSLKESNGILEDDMANQKLINSDLDAQYTEAELKEAHHKVLALEVELENKSHCYEDLEARCLELQLQLESMSKDCPNHGINQKDKPLRTDMEITAASEKLAECQETILNLGKQLKALATPKDASLIDKAIATQRSTISHTTPTKNVDPNPAAPKFMKMKNRSLLDQMLAEDDTKGNVSKASDGNFNPTTIPGIIEPLEKILSLNKVNKDQDDSASVNSLAIVPAKKGSLWKKLLWKKKKSDNLKTPLPKNT* 1101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3363 1100 Coils Coil 143 170 - -
Lja4g3363 1100 SUPERFAMILY Tropomyosin 797 964 - -
Lja4g3363 1100 Pfam Filament-like plant protein, long coiled-coil 64 974 IPR008587 -
Lja4g3363 1100 Coils Coil 330 350 - -
Lja4g3363 1100 Coils Coil 178 233 - -
Lja4g3363 1100 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 1090 - -
Lja4g3363 1100 PANTHER FILAMENT-LIKE PLANT PROTEIN 1 1090 - -
Lja4g3363 1100 Coils Coil 903 923 - -
Lja4g3363 1100 Coils Coil 33 60 - -
Lja4g3363 1100 Coils Coil 793 862 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3363 Lja-Chr4 63485268 63491378 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3363 - - lja:Lj0g3v0277459.1 1606.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0320 2 2888681 2893014 Lja4g3363 4 63485268 63491378 ECH
Lja4g3363 4 63485268 63491378 Lja4g3363 4 63485268 63491378 ECH
Lja2g0320 2 2888681 2893014 Lja4g3363 4 63485268 63491378 PCT