Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0320 ATGTTGTCAATGAAGCAACATCTTGATGATTCTGTGCAGCAGCTATTAGTTTATGAAGAAAGAGTGGCCCATCTGGATGCTTCTCTCAAGGAATGCATGCAACAGTTACATTTTGTCAGAGAAGAACAAGAGCAGAGGATTCATGACGCTGTGATGAAGACTTCAAAAGAGTTTGAACAAGCACGTGTGGTTTTCGAAAAGCAGCTATCAGAGACCAGTAAAATGCTTGCTAAATGTGGGATAGAAAATTCTCATCTTAACAAATCTGTTTTTGCTAAAGAAAATTTGATTGAAGATCTGAAAAGACAATTGGCTCAAGCAGAGGCACATCATATTGCACTGATGATTAGATTTGAGTCAACTGAGAAAGATAATGCTTCTCTGAAGTATGAGGCTCAAGTGCTTCAGAAGGAACTTGATATTCGAAATGAGGAGAGAGAATTTACTCGTCGAGTAGCTAATGCTTCTCATAAGCAGCACTTAGAGAGTGTGAAAACAATTGCCAGGTTAGAATCAGAATGTCAGAGGATGCGTCTTCTTGTTAAAAAACGGTTGCCAAGTCCCTCTGCACTGGCAAAAATGAAAAAGGAAGTCGAAATGTTGGGACAGGGTTCACTTGAAATGAGGAGGAACAAGTTGCATTCAACCGGTTTAATGATTGAATCTTCAGTAAAAAACACTCCTGAGACTACCATTAGAAGAATCACTACTTTGACTGAGCAACTATGTTCTGTGGAAGAAGAAAACAAGACTTTGAGAGAATCCCTAAATAGGAAAACAAATGAAGTCCAATTCTCCAGGGCAATGCTTTCTCGCACAGCTTCTAAACTGTTGCAACTTGAGTCAGAGATTGAATCTAAAGGTAAAACGACCTTGGAGCAGCCTAGAAGCAATCTTGCATTGGAAGAGATCTCTTTGGCATCGATGTCTGACATTGACAGTGATGACAAGGTTAGCTGTGCTGAATCCTGGGCTTCTGCATTGATTTCAGAGTTGGAGCACTTCAGAAGTGAAAAACAGAAGGAATCATTTGCATGCAGAAGTGTTGGACCTTCAGACATAAAACTTATGGATGACTTCGTTGAAATGGAGAAACTAGCAGTGGTCTCTGTCGAAAAAGCCCCTGAAATTTCTCATGCTTCTTCAGAAGGAAATAATAAAGTAAATGGCTTCTCAGAGACTGGATCAAACGAGATTACCTCTGAAGTAATAGGTAAGGAAATCATTCCAGTGTCTGATCATTTATCAGCGTTCTCAACATCAAATCAGGAAACATGTTCCAGTGACTTAAAGCACAAAGTTCCTGGTTGGTTGAAGGATGTAGTTAAAGTGATCTTGGAACAAAACTGTGCCACTCATAAGAACCCTGATGATATAATTGAAGATATTAAATTGGCTATGAAGCATCTAAATAATCAAGATCGATGTGGGTTTGATTCAAACAAAGGCTCAGGTCAATTTGATGAAGTAGATCACACCTCACAGCAACCTTTGCATAATTCTGCAGTAGATCCATCAGGTGAAGTAAATGGTTCTAAGATTTCATCAGTAAAGAGAACTAAACAACAATCTGAGAGAGATCAGAGTAAATCAATAGGCAAGATAATTGAGCTTATTGAAGGGATCAACGTACCTGATGAGGATATTGATAATTCAGATCCCTTGTGCAAAAGAGATGGAAATATCCTTGCACATAAGAATGAAGGAATTCCAACAGGCTACATGGCACGAGTTTTCCAGTGGAAAACATCTGATCTTGGTAATGTCTTACAGAAATTTCTTCACGTGTGTTACGATTTACTGAATGGCAAAGCTGATCATGAAAAATTTGCCACAGAACTAACTACGGCTTTGGATTGGGTTATAAATCACTGCTTCTCACTTCAGGATGTTTCAAGTATGAGGGATGCCATTAAAAAACAATTTGATTGGGATGAGACACAAAGTGAAAATGAAGCTGAAACTGAGATGTTTGCAGACACAGATAAGTTGCATCTTCCCAGAGAACAGTTACCATGTTTTCCTGCACTAACTAATTCAGATTGTCATGATCTGACTAAGGAAATGCAACATGATGAGAAGGAAGAACTTAAAAATATTAAAGGTAAAGTGATCCCTTCTGAATCTGAAAAGGAATCCTTGGAACGGAGGCTTCAATCAGCAATGAATCAACTTCAGGAATCGGAGAAAACTATTGCCAGCTTGAGATTGGAGTTACAAACCATGAAAGAATCCAAAGGAATATTCGAGGATCAAATGCAAAATCACGCATCAATGAATGAGGAGATTGACTCTCAGCTTACAGAAACTGAATTAAAAGAGGCTCATCACAAGATTTTGGCATTAGAAATGGAACTGGAGAACAAGAACCACTATTGTGAAGAATTAGAGACTAGATATGTTGAGCTTCAGCTCCAGCTTGGAAGGATGACAAAGGAGTGTACAAATAATGACATTAACCAGACAGATAAGCAGCTGCAAACTGACTGGGAGATAACAGCTGCTTCAGAAAAGTTGGCAGAGTGTCAAGAGACCATCCTTAACCTTGGGAAGCAGTTGAAGGCATTGGCTGCACCAAAGGATGCCTCCCTCTTTGACAACGCTGTAGCCGCCCAATGCCATGCAATTACAAACTCAGCATTGGCTGCACCAAAGGATGCCTCCCTCTTTGACAACGCTGTAGCTGCCCAATGCCATGCAATTACAAACTCAACTACTTTCCCAAAGAAAGCAATGAAGATGAAAAATCGACTTTCTCTATTGGATCGGATGTTGGCTGAAGATAATCACAAAGCCAAGGTTTGCAAAGTAAGTAACAGAAGCTCCAGTCCCACCTGCATTCCTGGTTTTATACAGCCCCTGGAAAAGGTATTAGTTTTGAACAGACTTCAAGGCCAGGATGACAGTGCTTCTGTTAAGTCTTTGGCCATCGTACCTGCCAAGAAATCTAGAGGTCGTAATTTGTGGCGAAGGCTACTCTTAGAGAGAAAGAAGAAAGCCAAAAAGAATGCACATGTTCCATTTAACACATGA 3033 0.3983 MLSMKQHLDDSVQQLLVYEERVAHLDASLKECMQQLHFVREEQEQRIHDAVMKTSKEFEQARVVFEKQLSETSKMLAKCGIENSHLNKSVFAKENLIEDLKRQLAQAEAHHIALMIRFESTEKDNASLKYEAQVLQKELDIRNEEREFTRRVANASHKQHLESVKTIARLESECQRMRLLVKKRLPSPSALAKMKKEVEMLGQGSLEMRRNKLHSTGLMIESSVKNTPETTIRRITTLTEQLCSVEEENKTLRESLNRKTNEVQFSRAMLSRTASKLLQLESEIESKGKTTLEQPRSNLALEEISLASMSDIDSDDKVSCAESWASALISELEHFRSEKQKESFACRSVGPSDIKLMDDFVEMEKLAVVSVEKAPEISHASSEGNNKVNGFSETGSNEITSEVIGKEIIPVSDHLSAFSTSNQETCSSDLKHKVPGWLKDVVKVILEQNCATHKNPDDIIEDIKLAMKHLNNQDRCGFDSNKGSGQFDEVDHTSQQPLHNSAVDPSGEVNGSKISSVKRTKQQSERDQSKSIGKIIELIEGINVPDEDIDNSDPLCKRDGNILAHKNEGIPTGYMARVFQWKTSDLGNVLQKFLHVCYDLLNGKADHEKFATELTTALDWVINHCFSLQDVSSMRDAIKKQFDWDETQSENEAETEMFADTDKLHLPREQLPCFPALTNSDCHDLTKEMQHDEKEELKNIKGKVIPSESEKESLERRLQSAMNQLQESEKTIASLRLELQTMKESKGIFEDQMQNHASMNEEIDSQLTETELKEAHHKILALEMELENKNHYCEELETRYVELQLQLGRMTKECTNNDINQTDKQLQTDWEITAASEKLAECQETILNLGKQLKALAAPKDASLFDNAVAAQCHAITNSALAAPKDASLFDNAVAAQCHAITNSTTFPKKAMKMKNRLSLLDRMLAEDNHKAKVCKVSNRSSSPTCIPGFIQPLEKVLVLNRLQGQDDSASVKSLAIVPAKKSRGRNLWRRLLLERKKKAKKNAHVPFNT* 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0320 1010 Pfam Filament-like plant protein, long coiled-coil 2 864 IPR008587 -
Lja2g0320 1010 SUPERFAMILY Tropomyosin 693 855 - -
Lja2g0320 1010 Coils Coil 711 745 - -
Lja2g0320 1010 Coils Coil 90 138 - -
Lja2g0320 1010 Coils Coil 779 813 - -
Lja2g0320 1010 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 879 - -
Lja2g0320 1010 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 879 1004 - -
Lja2g0320 1010 MobiDBLite consensus disorder prediction 476 529 - -
Lja2g0320 1010 PANTHER FILAMENT-LIKE PLANT PROTEIN 1 879 - -
Lja2g0320 1010 PANTHER FILAMENT-LIKE PLANT PROTEIN 879 1004 - -
Lja2g0320 1010 MobiDBLite consensus disorder prediction 487 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0320 Lja-Chr2 2888681 2893014 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0320 - - lja:Lj2g3v1890960.1 1934.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0320 2 2888681 2893014 Lja4g3363 4 63485268 63491378 ECH
Lja2g0320 2 2888681 2893014 Lja2g0320 2 2888681 2893014 ECH
Lja2g0320 2 2888681 2893014 Lja4g3363 4 63485268 63491378 PCT