Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3360 ATGTGCTCGCAATGCAGAGCAGCATCACCTGCACAAATCGTTCTTCTCCTTCTCCCACTCATCATCTCTTCCATCTTCTTCACCTCCTCCACCGCATGCTCTAACGGCAATTGCCAGGTTTCGGAAGCATGTTTAACCGCTACGGATTGTGGGCAAGGTCTCTACTGCGGTAATTGTCCTGCTTTGGGCTTGAACCGACCCATCTGCACCAGAGGCCAACCCTCGCTTCCCACATCCATAGTCAATGGGTTGCCCTTCAACAAGTACTCATGGATAGTCACCCACAATTCGTTCAGCATCGTGGATTCGCCGCCTTACCCGGGTGTTCAGAGATTGACATTTTACAATCAAGAAGATGCTGTGGCTAACCAGTTGAGGAATGGAGTGAGGGGGCTGATGTTGGATATGTACGACTTCCAGAATGATATTTGGCTCTGTCATTCATTTAAAGGGGAATGCTTCAACTTCACTGCCTTTCAACCTGCTATAAATACTTTGAAAGAAGTGGAAGCATTCTTGACGGGAAATCCAACTGAGATTGTCACCATCATAATTGAAGACTATGTGCATACTCCAAAGGGGTTGACTAATCTGTTCAAAAGTGCTGGACTGGATAAGTATTGGTTTCCAGTGTCCAAGATGCCTAAAAAGGGTGACGACTGGCCCACTGTAACAGAGATGGTTCAAGCGAATCATCGGCTTGTTGTTTTCACTTCGGATGCCTCAAAGGAAGCTGAAGAAGGAATAGCTTATCAGTGGAAGCACATGGTTGAAAATGAGTCTGGAGATCCTGGAGTTCGGCGAGGTTCTTGCCCGCATAGGAAAGAATCAAAGGCATTGAATTCTAGAAGTGCGTCGCTTTTCTTAATGAATTACTTTCCAACATATCCAGTTCAAGCTGATTCGTGCAAAGAGCATTCCGCTCCACTTGCTGAGATGGTGAATACATGCTACAAAGCTGCAGGGAATGTGTTGCCCAACTTCATAGCTGTTAACTTTTACATGAGGAGTGATGGAGGTGGTGTTTTTGATATTGTGGATAAAATGAATGGCCAAGAATTGTGTGGGTGTAGTACAATCACAGCCTGCCAGGCAGGTGCTTCGTTCGGAACTTGTAAGAATATTTCTCTACCTAGTACAAGTCCAGTGAGTAACACTGGTGCAAGCGTTACTGGTTCTGTTCAGTTCTCTAGCTCAGCTTCTCCTGTCTGTTTTCCAAATTGCTTCTTGTTTTACATCATACTTATCGCAGCCTTGTTGCAACTATGA 1269 0.4531 MCSQCRAASPAQIVLLLLPLIISSIFFTSSTACSNGNCQVSEACLTATDCGQGLYCGNCPALGLNRPICTRGQPSLPTSIVNGLPFNKYSWIVTHNSFSIVDSPPYPGVQRLTFYNQEDAVANQLRNGVRGLMLDMYDFQNDIWLCHSFKGECFNFTAFQPAINTLKEVEAFLTGNPTEIVTIIIEDYVHTPKGLTNLFKSAGLDKYWFPVSKMPKKGDDWPTVTEMVQANHRLVVFTSDASKEAEEGIAYQWKHMVENESGDPGVRRGSCPHRKESKALNSRSASLFLMNYFPTYPVQADSCKEHSAPLAEMVNTCYKAAGNVLPNFIAVNFYMRSDGGGVFDIVDKMNGQELCGCSTITACQAGASFGTCKNISLPSTSPVSNTGASVTGSVQFSSSASPVCFPNCFLFYIILIAALLQL* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3360 422 SUPERFAMILY PLC-like phosphodiesterases 79 354 IPR017946 GO:0006629|GO:0008081
Lja4g3360 422 PANTHER UNCHARACTERIZED 18 388 - -
Lja4g3360 422 PANTHER PI-PLC X DOMAIN PLANT-LIKE PROTEIN 18 388 - -
Lja4g3360 422 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 85 193 - -
Lja4g3360 422 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 33 - -
Lja4g3360 422 CDD PI-PLCc_At5g67130_like 77 350 - -
Lja4g3360 422 Gene3D Phosphatidylinositol (PI) phosphodiesterase 75 352 IPR017946 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3360 Lja-Chr4 63443968 63448719 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3360 - - gmx:100793490 703.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0323 2 2909192 2913525 Lja4g3360 4 63443968 63448719 PCT