Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0323 ATGTGCTCTCGTTTCCTAGATTCCCATACCAAATGCAGAGCACCAATCATCAGCTACCTCTTCGTATCACTCATCTCCTCCCTCTTCTCCACCTCCTCCGCCGCCTGCTTCAATGGAAATTGCCAGGTTCTCGAAGCATGTTCAGCTGCTGCAGATTGCAGACCTGGTCTCTATTGCGGTAATTGCCCTGCTCTGGGTAGGAAACAGCCTGTCTGCACCAGAGGCCAAGCCACCATTGTTACATCCATAGTGAATGATTTGCCCTTCAACAAGTACTCATGGATCATGACCCATAATTCATTCAGCATCGTCGATGCACCCTCGTTTACTGGTGCTCAGAGACTCACCTTCTACAATCAAGAAGATACTGTTACTAACCAGTTAAGGAATGGAGTGAGGGGATTGATGTTGGATATGTACGACTTCGAGAATGATATTTGGCTTTGTCATTCACTTCAAGGGCAATGCTTCAACTTCACTGCCTTTCAACCTGCGATTAATACTTTGAAAGAAGTAGAAGCATTCTTGGCTGAAAATCCAACAGAGATTGTCACCATTGTAATTGAAGACTACGTGCGTACGCCAAAAGGGTTGATTAATCTGTTCACAAATGCTGGACTGGATAAATATTGGTTTCCTGTGTCTAATATGCCAAGAGACGGTGAAGATTGGCCTACTGTGATAGAGATGGTTCAAGCAAATCGCCGACTTCTTGTTTTCACTTCTGATGCTTCAAAGGAAGCTGAAGAAGGGATAGCTTATCAGTGGAGGTACATGGTTGAAAATGAGTTTGGAGATCCTGGAGTTCAACGTGGTTCTTGCCCGAATAGAAAAGAATCAAAGCCACTAAATTCTAGAAGTGCATCACTTTTCTTGCAGAATTACTTCCCAACAGATCCAGTTGAAGCTGACTCGTGCAAAGAGCATTCGGCTCCACTTGCAGATATGGTGAATACATGTTACAAGGCTGCAGGGAATGTGCTGCCGAATTTTATAGCAGTTAATTTTTACATGAGGAGTGACGGTGGTGGTGTTTTTGATATCATGGATAAAATGAATGGCCATACATTGTGTGGGTGTAGTACAGTCACCGCTTGCCAGGAGGGATCACCTTTTGGATCTTGCAATAACACTTCTGTACCAAATACAAGTCCATTGACCAACACCGCTGGAAGCTTTACTGGATCTGTTCAGTTCTCTAGATCAGCTTCACCAGTCCATTCTCCAAATTGGTTGCTTTTTTTCCTCGTGTTTTGCTTCCTGATTATTGCAGTTTTGTCACAATTGTGA 1290 0.4372 MCSRFLDSHTKCRAPIISYLFVSLISSLFSTSSAACFNGNCQVLEACSAAADCRPGLYCGNCPALGRKQPVCTRGQATIVTSIVNDLPFNKYSWIMTHNSFSIVDAPSFTGAQRLTFYNQEDTVTNQLRNGVRGLMLDMYDFENDIWLCHSLQGQCFNFTAFQPAINTLKEVEAFLAENPTEIVTIVIEDYVRTPKGLINLFTNAGLDKYWFPVSNMPRDGEDWPTVIEMVQANRRLLVFTSDASKEAEEGIAYQWRYMVENEFGDPGVQRGSCPNRKESKPLNSRSASLFLQNYFPTDPVEADSCKEHSAPLADMVNTCYKAAGNVLPNFIAVNFYMRSDGGGVFDIMDKMNGHTLCGCSTVTACQEGSPFGSCNNTSVPNTSPLTNTAGSFTGSVQFSRSASPVHSPNWLLFFLVFCFLIIAVLSQL* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0323 429 Gene3D Phosphatidylinositol (PI) phosphodiesterase 75 355 IPR017946 GO:0006629|GO:0008081
Lja2g0323 429 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 88 196 - -
Lja2g0323 429 PANTHER UNCHARACTERIZED 3 393 - -
Lja2g0323 429 SUPERFAMILY PLC-like phosphodiesterases 79 357 IPR017946 GO:0006629|GO:0008081
Lja2g0323 429 CDD PI-PLCc_At5g67130_like 81 353 - -
Lja2g0323 429 PANTHER PI-PLC X DOMAIN PLANT-LIKE PROTEIN 3 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0323 Lja-Chr2 2909192 2913525 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0323 - - gmx:100810371 744.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0323 2 2909192 2913525 Lja2g0323 2 2909192 2913525 ECH
Lja2g0323 2 2909192 2913525 Lja4g3360 4 63443968 63448719 PCT