Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3266 ATGAATCTATGGAGATTTTTGTTTTTTTTTTTTGCTAAATTTATTTTATTTTCTATCTTCTCGTGGCTATTTGTGCATCTGGGCCATTGTGTTTCTAACTGTTCTGTTTCTGAGTTCTTGTTTGTTATGTTCCTGGAAATGGGGCTTGAAGGTCTCATTCCAATGCACAAGCGTTCAAAGAGCTTTCCCAATAAAAGAACAGTCGAGGAGGATAATTCTGATGACGTTGAAGCCTTAGATCGAATAAAGCTGGATACAGGTTACCTCACGGAATGCGGTGAAGCAAGGAAAAAACCGACCCGTACAAATGATGTTCAATGTGCTCTCAAGCAAGAGATTCTACAGTTAGAAAAAAGACTACAAGATCAATTTGAGGTCAGATGCACATTAGAAAAGGCACTTGGATACAGACCTACATTTCTTGTTAATCCAAATGAGATGGCCATCCCCAAGCCTACCGCAGAATTAATTAAAGAAATTGCGGTGCTTGAGTTAGAAGTTGTGTATTTGGAACAACATCTCCTCTCCTTGTACCGTAAAGCATTTGATCAACAATTATCCTTTGTCGCTCCATCCACCAACGAGGAAAGAGTAAAGTCTCCTCCTCCAACACCTAGAGCAAGATTCACTGAAACTTCTAAGCCTGAGGTATTGTTTAAAAGAGGAGGTTCTGCAGTAAAATCTATTGATCATGAGCTTGATACTCCGCAAAAGGAATATAATGGATATGAACCTGAGACTCTGGAGAAAGAGCAGAACTTACATCAGCAAGAAGGAAAGCATTTAGACTCTGGTATATATCGTTGCCACTCCTCATTATCCCAGTGTTCGTCAGCATTCGCAACAAGATCATCTCCTCCTTCAGAAGGGTTGACCGAATCTCTGCGTGCTTGCCATTCACAGCCCTTGTCCATGATGGAGAATGTTGATACTCCAACAAAAGTAATCAGCCTGGCAGAACATCTTGGTACCCGTATATGTGATCATATTCCAGATGCTGCTAATAGGCTTTCTGAGGAAATGGTTAAATGTATATCAGCTATTTATTGCAAACTCGCAGAACCACCTGTGACGAATCCTAGCTTTTCATCTCCCAGTTCATCCTTGTCTTCAACAAGTCCATTTTCTATTGGAGATCAAGGGGACATGTGGAGTCCAGGGTATAAGAATAACTCCGCTTTCGATCTACGGTTAGACAATCCTTTTCATGTCGAAGGACTCAAGGAGTTTAGTGGGCCATACAGCACTATGGTTGAGGTATCGTGGATATATAGAGAGAATGAAAAATTGGGTGATACAGCGCAGTTGCTTCAGAATTTCAGGTCACTAATCTGTCAATTAGAAGAGATAGATCCTGGGAAGTTGAAACATGAGGAGAAGTTAGCTTTCTGGATCAATATACACAATGCTTTAGTGATGCATGCATTTTTGGCTTATGGAATTTCTCAAAGCAGTGTGAAAAGAGTCTTTCTTCTGTTGAAGGCTGCATATAATATTGGGGGTCATACAGTTAGTGCAGACACAATACAGAGTACTATACTTGGGTGCCGGATGTCGCGTCCTGGACAGTGGTTCCGCTTGCTCTTTTCTCCAAAGACAAAGTTCAAAGCTGGGGATGGACGACAAGCATACGCAATTGAGCATCCTGAGCCTCTTCTGCACTTTGCACTATGTTCAGGAAACCACTCTGATCCCGCGGTACGTGTATATACACCCAAGAGAGTGTTTGAACAACTAGAAGTCGCGAAAGAAGAATACATTCGAGCTACATTTGGGGTACGCAAGGACAAGAAGATACTTCTGCCCAAGATTGTAGAGTCATTCGCGAAGGACTCAGGTTTGTGTCATGCTGCTATTATGGAGATGATACAACAGGCTGTACCTGAATTCCTAAGAAAGGGTGTTAAGAAATGTCTCCTTGCAAAATCCCAGAAGAACATAGAATGGACTCCACACAACTTCACTTTTCGGTATCTCATACCTAAGGAGCTGGTAAAATAG 2001 0.4163 MNLWRFLFFFFAKFILFSIFSWLFVHLGHCVSNCSVSEFLFVMFLEMGLEGLIPMHKRSKSFPNKRTVEEDNSDDVEALDRIKLDTGYLTECGEARKKPTRTNDVQCALKQEILQLEKRLQDQFEVRCTLEKALGYRPTFLVNPNEMAIPKPTAELIKEIAVLELEVVYLEQHLLSLYRKAFDQQLSFVAPSTNEERVKSPPPTPRARFTETSKPEVLFKRGGSAVKSIDHELDTPQKEYNGYEPETLEKEQNLHQQEGKHLDSGIYRCHSSLSQCSSAFATRSSPPSEGLTESLRACHSQPLSMMENVDTPTKVISLAEHLGTRICDHIPDAANRLSEEMVKCISAIYCKLAEPPVTNPSFSSPSSSLSSTSPFSIGDQGDMWSPGYKNNSAFDLRLDNPFHVEGLKEFSGPYSTMVEVSWIYRENEKLGDTAQLLQNFRSLICQLEEIDPGKLKHEEKLAFWINIHNALVMHAFLAYGISQSSVKRVFLLLKAAYNIGGHTVSADTIQSTILGCRMSRPGQWFRLLFSPKTKFKAGDGRQAYAIEHPEPLLHFALCSGNHSDPAVRVYTPKRVFEQLEVAKEEYIRATFGVRKDKKILLPKIVESFAKDSGLCHAAIMEMIQQAVPEFLRKGVKKCLLAKSQKNIEWTPHNFTFRYLIPKELVK* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3266 666 PANTHER TRANSPORTER, PUTATIVE-RELATED 52 666 - -
Lja4g3266 666 Pfam Leucine-zipper of ternary complex factor MIP1 103 184 IPR025757 -
Lja4g3266 666 PANTHER UNCHARACTERIZED 52 666 - -
Lja4g3266 666 Pfam Protein of unknown function, DUF547 454 587 IPR006869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3266 Lja-Chr4 61442312 61447234 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3266 - - gmx:100816025 996.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0394 2 3588948 3593456 Lja4g3266 4 61442312 61447234 PCT