Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0394 ATGCTGGGACTGAGTTTCACTCCAAGGCACAAGCGTTCAAACAGTGTTCCTGATAAGAACAGAGTTGAAAATGATAATGCAGAAAGCCTTAAGGTCTCAGCACAACGAATGAAGCTGGATGAGGGTTACATCACGGAATGTGCTCAAGCTAGGAAAAAAGGAGCCCCTACAAGTGAAATCCACAGTACTCTGAAGCAAGAGACTCTCCAGCTAGAGAGAAGATTACAAGATCAATTTGAGGTTAGATGCACGTTGGAAAAGGCACTTGGATACAAATCTCCATCTCTAGTTAATTCAAGTGAAATGATTATGCCCAAGCCAGCCACAGAATTAATCAAGGAAATTGCGGTGTTAGAAATGGAAGTTGTGTACTTAGAACAACATCTTCTCTCCTTGTACCGTAAAGCTTTCGATCAACAACTATCTTCTGTATCTCCTCCTACCAAGGAGGAAAGCTTGAAGTACCCTCTAACAACTCCTAGAGCACAAGTTGTCAAGGCTTCATTGCCTGAGGTCTTAACCAAAGAAGAATATCCTACAGTACAATCTAATGACCATGAGCTTGAGGCAATGCGAAAGGAACATGATAGAAATGAACTTGATAATTTGAGGAAAGAATGCAATGGAGGTTGGCCAGAAGAAAAACACTTAGATTCTGGTGTTTATCGTTGCCATTCCTCATTATCTCAGTATTCAGCATTTACAAGATCATCTCCTCCAGCAGAACCTTTAGCTAAATCTCTGCGTGCCTGTCATTCGCAACCATTGTCAATGATGGAGTATGCCCGTGGCTGTTCATCAAATATAATCAGTCTTGCCGAACATCTCGGTACCCGAATCTCTGATCATGTTCTTCCAGTAACACCTAATAAACTTTCTGAGGATATGGTCAAATGCATATCAGCTATATATTGCAAGCTTGCAGACCCTCCTATGACACTTCCTCCTGGCCTTTTATCTCCCAGTTCATCCTTGTCCTCACCAAGTGCTTTTTCTATTGGAGATCAAGGTGATATGTGGAGCCCCGGGTTCAGGAACAATTCATCTTTCGATGCACGGTTGGACAATTCTTTCCATGGTGAAGGAGTTGAGGAGTTTAGCGGGCCATACAGCACCATGGTTGAAGTATCTTGGATTTATAGAGAGGGTCTGAAATGGGGTGATATAGAGAAGTTGCACCAGAAATTCAGGTCGCTTATATGTCGATTGGAAGAAGTAGATCCTCGGAAGTTAAAACATGAGGAGAAGCTAGCTTTCTGGATCAACATACACAATGCTTTGGTTATGCATGCATTTTTGGCGTATGGGATTCCACAAAACAATGTGAAAAGAGTCTTTCTTCTCTTGAAGGCTGCATATAATGTTGGTGGTCGTACAGTCAGTGCAGACACAATACAGAGTACAATACTTAGGTGCCGGATGTCTCGCCCTGGACAGTGGCTACGCATGTTTTTTTCTTCAAGGACAAAATTCAGAAGTGGAGATGGGCGTCAAACATATGCAATTGAGAATCCTGAGCCTCTTTCACACTTTGCACTCTGCTCAGGAAACCATTCTGATCCAGCGGTACGTGTATACACACCAAAGAGGGTGTTTCAAGAGCTAGAAGTTGCAAAGGACGAGTACATTCGAGCTACATTAGGGGTACGGCGCAAGGACCAAAAAGTACTTGTACCAAAGCTTGTTGAGACATTCACCAAGGACTCAGATATGTGTCCTGGTGGTGTTATGGAGATGATCCAAGAGTCCCTACCTGAATCACTGAGAAAGAGTGTTAAAAAATGCCATCAGCTTGCAAAATCCCGGAAGTGCATAGAATGGATTCCCCATAACTTCACTTTTCGATATCTCATATCTAAGGATGTGTTAAAATGA 1875 0.4261 MLGLSFTPRHKRSNSVPDKNRVENDNAESLKVSAQRMKLDEGYITECAQARKKGAPTSEIHSTLKQETLQLERRLQDQFEVRCTLEKALGYKSPSLVNSSEMIMPKPATELIKEIAVLEMEVVYLEQHLLSLYRKAFDQQLSSVSPPTKEESLKYPLTTPRAQVVKASLPEVLTKEEYPTVQSNDHELEAMRKEHDRNELDNLRKECNGGWPEEKHLDSGVYRCHSSLSQYSAFTRSSPPAEPLAKSLRACHSQPLSMMEYARGCSSNIISLAEHLGTRISDHVLPVTPNKLSEDMVKCISAIYCKLADPPMTLPPGLLSPSSSLSSPSAFSIGDQGDMWSPGFRNNSSFDARLDNSFHGEGVEEFSGPYSTMVEVSWIYREGLKWGDIEKLHQKFRSLICRLEEVDPRKLKHEEKLAFWINIHNALVMHAFLAYGIPQNNVKRVFLLLKAAYNVGGRTVSADTIQSTILRCRMSRPGQWLRMFFSSRTKFRSGDGRQTYAIENPEPLSHFALCSGNHSDPAVRVYTPKRVFQELEVAKDEYIRATLGVRRKDQKVLVPKLVETFTKDSDMCPGGVMEMIQESLPESLRKSVKKCHQLAKSRKCIEWIPHNFTFRYLISKDVLK* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0394 624 PANTHER UNCHARACTERIZED 2 624 - -
Lja2g0394 624 Pfam Leucine-zipper of ternary complex factor MIP1 59 139 IPR025757 -
Lja2g0394 624 PANTHER TRANSPORTER, PUTATIVE-RELATED 2 624 - -
Lja2g0394 624 MobiDBLite consensus disorder prediction 12 26 - -
Lja2g0394 624 MobiDBLite consensus disorder prediction 1 26 - -
Lja2g0394 624 Pfam Protein of unknown function, DUF547 408 543 IPR006869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0394 Lja-Chr2 3588948 3593456 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0394 - - gmx:100813952 941.414
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0394 2 3588948 3593456 Lja2g0394 2 3588948 3593456 ECH
Lja2g0394 2 3588948 3593456 Lja4g3266 4 61442312 61447234 PCT