Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3248 ATGGGTAAACCGCCGCCGACACTATCATACTACCTCTCGGAACACCCATCCATCGTGGGGTTCCGATGGAGCCACAGCCACTCATGGGGCTCCACGTGGTCCTTCCTCTTCACCGCCATAGCCACCTACCTCACCCTCTCCCTCCTCCTCCACCTCTCCCTCTCGCTCCTCCTCCCCCGCCGCCGCCCCATCCCACTCGGCCACCTCCCGGCAATCCACAGCCTCTCCATGTCCCTCATCTCCGCCGCTATTTTCACCGGAACACTCGCCTCCGCCGCCGCCGAGATCCGCGACACGCGCTGGTTCTGGCGCCGCTCCAAAACCCCTTTTGAATGGCTCCTCTGTTTCCCCCTCGGAACCCGACCCTCCGGGCGCGTGTTCTTCTGGTCCTACCTCTACTACCTCTCGCGGTTCCTCCACATGGCGAGGACCGTGTTCTGCATCCTCCGCCGCCGTAGATTATCATTTTCCCAGCTCTTCAACCACTCAATCTCCACCTTCGTGCTGGCGATTCTCTTCACCACGCTCGTGTACGCGCTTGTGTATGGGTACAGGTTCGGGACTGCGATTGGGTTTCGCGGCGCGTGCTTTCCGTTTGTGTTGAACTGCCAGATTGTGTTGCTGGGTTGTAACGTGGCGTGCCATGTTGGGGTTTTTCTGCTGCATTTCTTCTTCAAAGGTGGGTGCAATGGGATTGGCGCGTGGGTGTTCAACTCTGTTCTCAACACTGTTGTGCTGTTGCTGTTTCTCAATTTCTATGTGAGGATGTATGTTTTTGGTAAGAGGAGAAAGGTTGAGTGTGGGTGA 807 0.5762 MGKPPPTLSYYLSEHPSIVGFRWSHSHSWGSTWSFLFTAIATYLTLSLLLHLSLSLLLPRRRPIPLGHLPAIHSLSMSLISAAIFTGTLASAAAEIRDTRWFWRRSKTPFEWLLCFPLGTRPSGRVFFWSYLYYLSRFLHMARTVFCILRRRRLSFSQLFNHSISTFVLAILFTTLVYALVYGYRFGTAIGFRGACFPFVLNCQIVLLGCNVACHVGVFLLHFFFKGGCNGIGAWVFNSVLNTVVLLLFLNFYVRMYVFGKRRKVECG* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3248 268 PANTHER FATTY ACID ACYL TRANSFERASE-RELATED 7 264 IPR002076 GO:0009922|GO:0016021
Lja4g3248 268 PANTHER ELONGATION OF FATTY ACIDS PROTEIN 3-LIKE 7 264 - -
Lja4g3248 268 Pfam GNS1/SUR4 family 31 263 IPR002076 GO:0009922|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3248 Lja-Chr4 61211659 61212504 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3248 7 244 Acyl Lipid Metabolism Gene Families AT4G36830 62.598 4.21e-108 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3248 - - ahf:112788955 389.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3248 4 61211659 61212504 Lja4g3248 4 61211659 61212504 ECH
Lja2g0411 2 3759459 3760653 Lja4g3248 4 61211659 61212504 ECH
Lja2g0411 2 3759459 3760653 Lja4g3248 4 61211659 61212504 PCT