Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0411 ATGGGTAAAGCCTCGGCGGCGATTCAGACCCTCAGCTTCTACCTCTCCGAACACCCTTCTATTGTAGGATTCCGATGGAGCCACGCCCAATCCTGGGGCTCCACCTGGTCCTTCCTCTTCACCTCAATCGCCGTTTACATCGTCATCTCCCTCTTCCTCCACCTTCTACTTGCCATATTTCTCCGCCGTGGCCGACCCGTCCCTCTAGGTCCATTACCGGCGATCCATTTCCTCTCCGTGGCCCTCGTCTCCGCCACCATCTTCGCCGGAATTCTGCTCTCCGCCGCCACGGAAATTAAAGAGACACGGTGGTTCTGGCGCCGGTCAAAAACCCCTCTCCAGTGGCTCCTCTGTTTCCCTCTCGGTACACGCCCCTCCGGCCGAGTCTTCTTCTGGTCCTACGTCTTCTACCTCTCGCGCTTCCTTCACATGTTGAGGACCGTCTTCGTCATCCTACGACGTCGTAAGCTCGTGTTCTTCCAGGTCTTCTACCACTCAATCTCCGCCTTCACGTCGTTCCTCTGGCTGGAATACTCGCAGTCGTTTCAGGTGCTGGCCATTCTGTTCACAACGCTGGCGTACGCCGTCATGTACGGTTACCGGTTTTGGACCGCCGTCGGGTCGTCGGCGCGTGGCGCGTGCTTCCCGCTTGTGTTGAATTGCCAGGTGGCGCTGTTGGGGTGCAATCTGGTGTGCCATGTTGGGGTGCTTCTGATGCATTTCTTTAAAGGTGGGTGCAATGGGATTGGTGCTTGGGTGCTCAATTCTGTGCTGAACGGTGCCGTTTTGTTTCTGTTTCTCAATTTTTATGTGAGGTTGTATCTTGGGAAGAAGAGGAAGGTGAATTGTGTTGGAGAAGAGGAAGCAGGTGCAGACAAACTGAAGTCCAATTAA 894 0.5503 MGKASAAIQTLSFYLSEHPSIVGFRWSHAQSWGSTWSFLFTSIAVYIVISLFLHLLLAIFLRRGRPVPLGPLPAIHFLSVALVSATIFAGILLSAATEIKETRWFWRRSKTPLQWLLCFPLGTRPSGRVFFWSYVFYLSRFLHMLRTVFVILRRRKLVFFQVFYHSISAFTSFLWLEYSQSFQVLAILFTTLAYAVMYGYRFWTAVGSSARGACFPLVLNCQVALLGCNLVCHVGVLLMHFFKGGCNGIGAWVLNSVLNGAVLFLFLNFYVRLYLGKKRKVNCVGEEEAGADKLKSN* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0411 297 Pfam GNS1/SUR4 family 34 280 IPR002076 GO:0009922|GO:0016021
Lja2g0411 297 PANTHER GNS1/SUR4 MEMBRANE FAMILY PROTEIN 7 285 - -
Lja2g0411 297 PANTHER FATTY ACID ACYL TRANSFERASE-RELATED 7 285 IPR002076 GO:0009922|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0411 Lja-Chr2 3759459 3760653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0411 4 260 Acyl Lipid Metabolism Gene Families AT4G36830 68.077 5.57e-126 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0411 - - gmx:100782066 462.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0411 2 3759459 3760653 Lja2g0411 2 3759459 3760653 ECH
Lja2g0411 2 3759459 3760653 Lja4g3248 4 61211659 61212504 ECH
Lja2g0411 2 3759459 3760653 Lja4g3248 4 61211659 61212504 PCT