Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3247 ATGGCGTTCAAGAAAACCCTCACCCAGCGTCTCCTCAGCATCACCAAACTCTCCTCACAATCCCTCTCCAACTGCCGCATTTCCTCTTCTTCCACCCGATCTCTCATCCCTCCCGCCGCCGCTAACCGCGACATTGCCCCCGATCCCGGAGACAACGGCATCTTCCGGAGGTTCCTCCACCGGAAAGCCGTCTTCCAGCCGGAGCTCCGTTCTCCGCCGGCCACCGATGACCTCCTCCGGAAGCTCCGGGAGATGGACATTGCCAGAAGCCGGATCCGACTCGACGGGCTGGTTACCCCGCCGGAGGCAGCGGCGGCGGTGATGGATGTGCGGAAGCTGCTGAGAGCGACGAAGCTGGAGGCGGTGAAATCGAAGCTCCGGAAGGTTCCTCAGAACTGCATAGGTTACTCGGAGTTTGTTGAAATGTGTGCCGAGAATTGCTCCGATCGCGATGAAGCGAAGAAGGTTGCGAAGATGTTGGATGATTCAGCCACTGTGATTATCCTCGGTGATGTCGTGTTTCTGAAACCTGAACTGGTAGCAAAAACCATCCAGTCTCTACTCCCGGTGCCAGGAGCCAAGGCATACGACCCAGCAGCACAAAAAGAACTTGAACTAATGGAGAAAAAGAAGGAAGTCATTGACAACAAAGCCGACGCCATGGTCCGCCGCGAGCTCTGGGGCGGGCTAGGCTTTCTGGTGGTGCAAACGGCCGCATTCATGAGGCTCACATTCTGGGAGCTTTCATGGGATGTGATGGAGCCCATATGCTTCTATGTAACCTCCATGTACTTCATGGCTGGCTACACGTTCTTCCTCAGGACCTCAAAGGAACCTTCCTTTGAAGGCTTCTACCAGAGCCGTTTCAGCACCAAGCAGAAGCGCCTCATGAAACTACACAATTTTGACATTGAAAGGTATAATGAGCTCAGGGCTACTTCGTCAATCACTCCCTGTTCCGAGTTGGATCATAAATCATTCGAAAATCTTGAGTTGTAG 999 0.5405 MAFKKTLTQRLLSITKLSSQSLSNCRISSSSTRSLIPPAAANRDIAPDPGDNGIFRRFLHRKAVFQPELRSPPATDDLLRKLREMDIARSRIRLDGLVTPPEAAAAVMDVRKLLRATKLEAVKSKLRKVPQNCIGYSEFVEMCAENCSDRDEAKKVAKMLDDSATVIILGDVVFLKPELVAKTIQSLLPVPGAKAYDPAAQKELELMEKKKEVIDNKADAMVRRELWGGLGFLVVQTAAFMRLTFWELSWDVMEPICFYVTSMYFMAGYTFFLRTSKEPSFEGFYQSRFSTKQKRLMKLHNFDIERYNELRATSSITPCSELDHKSFENLEL* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3247 332 Pfam Mitochondrial calcium uniporter 151 310 IPR006769 -
Lja4g3247 332 PANTHER CALCIUM UNIPORTER PROTEIN, MITOCHONDRIAL 1 321 IPR039055 GO:0051560
Lja4g3247 332 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 1 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3247 Lja-Chr4 61201355 61205316 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3247 K20858 - gmx:100809065 414.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3247 4 61201355 61205316 Lja4g3247 4 61201355 61205316 ECH
Lja2g0412 2 3768772 3771184 Lja4g3247 4 61201355 61205316 ECH