Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0412 ATGGCGTTCAAGAAAACCCTCGCCCAGCGTCTCTTCAACATCACCAAGCTCTCGTCGCAAACGCTCACCAACTGCCGAATCTCCTCCTCCTCCGTCAGCGTTTCTTCGAGGGCCACCGCCGAGCGTGGTGGCAGTAGTAGTATTGCTCCAGATCCAGGGGACAATGCCGGCGGCGTTTTCAGGAGGTTCCTCCACAAGCGTGCCGGGTACCAACAACCGGAGGTCCATTCACATTCTCCCCAGATCGCCGGAAACTTGGTGGAGCAGCTCAGGGCGATGGACATTTCACGGAGCCGGATCCGGTTGGAGGGGCTGATCAGCCCGCCGGAGGGGGAGAAGAAGCCGAACGGAATGGAAGGTGTGAGCGTTGAGGATGCGAAGAAACTGCTTAAGGTGGCTCAGGTGGAAATGGTGAAATCTAGACTGAGGGAAACCCAGAAAACCTGCATGCCCCTCTCAGAGTTCATTTCGATCTGCGCTGAACATTGCTCCGATCAGGATCAAGCTGTCAATGTTGCAAAGATGCTAGATGATTCTGCAGCTGTGATTATATTGGGAGATGTCGTTTTCATCAGACCTGAACAGGTAGCAAAAGCTATCCAGGGTCTGCTCCCTGTACCAGGAGCCAAGGTGCACGAATCATTAAGAAAAGAATTTGAAGAAATGCAGAAAGAGAAGTTGGCCATTGACACAAAAGCCGACACCTTGGTTCGCCGAGAGCTCTGGGGTGGGCTGAGTTTCCTGATATTGCAAACAGTTGGGTTCATGAGGCTCACATTTTGGGAGCTTACTTGGGACGTGATGGAACCAATATGCTTCTATTTGACCTCAATGTACTTCATGGCAGGGTACACATTCTTCCTCAGGACCTCAAAAGAACCATCCTTTGAAGGTTTCTACCAAGCCCGTTTCAGCTCCAAGCAGAAGCGCCTCATGAAGGCTCACAATTTTGACATTGGAAGATATAATCAGCTCAGAGCTGCTTTCCCTCCTACCATGCCTCCAAAGCTTGATTCCTCCATTGCTCTCCCATTTGATTCTGCTATACAGCATCACTGA 1059 0.5109 MAFKKTLAQRLFNITKLSSQTLTNCRISSSSVSVSSRATAERGGSSSIAPDPGDNAGGVFRRFLHKRAGYQQPEVHSHSPQIAGNLVEQLRAMDISRSRIRLEGLISPPEGEKKPNGMEGVSVEDAKKLLKVAQVEMVKSRLRETQKTCMPLSEFISICAEHCSDQDQAVNVAKMLDDSAAVIILGDVVFIRPEQVAKAIQGLLPVPGAKVHESLRKEFEEMQKEKLAIDTKADTLVRRELWGGLSFLILQTVGFMRLTFWELTWDVMEPICFYLTSMYFMAGYTFFLRTSKEPSFEGFYQARFSSKQKRLMKAHNFDIGRYNQLRAAFPPTMPPKLDSSIALPFDSAIQHH* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0412 352 MobiDBLite consensus disorder prediction 33 56 - -
Lja2g0412 352 Pfam Mitochondrial calcium uniporter 166 325 IPR006769 -
Lja2g0412 352 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 1 338 - -
Lja2g0412 352 PANTHER CALCIUM UNIPORTER PROTEIN, MITOCHONDRIAL 1 338 IPR039055 GO:0051560
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0412 Lja-Chr2 3768772 3771184 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0412 K20858 - gmx:100814253 449.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0412 2 3768772 3771184 Lja2g0412 2 3768772 3771184 ECH
Lja2g0412 2 3768772 3771184 Lja4g3247 4 61201355 61205316 ECH