Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3246 ATGGGAGGGCAATCCAGCAAGATGAGTAGTGTTGATGCCCCCACATCCATCAACATGGGTACCCATTCCCTGTATGCAGCTGATTTGAGCTCCTATGAAGCTGCATGTGTGAAAGATCCAAGCTTGCAATCTTTTGATGCCACCATTCAGGGGCACACCAACAGGGTGATTAGTTCCCTTGCTCATGGGGTTGAGGTTCGATCGTTGTCTTTTGACTCGCTGAGAGAAGTGACTGATAGTTTGCTTGAGATGAACCAGGAAGTAGTCAAAGTTATTTTGGATTGCAAGAAAGATATATGGGGCAACAAGGAGTTGTTCGCCTTGGTGAATGACTATTTTGATAATAGCCTCCAGACGTTGGAGTTCTGCAATTCTCTTGAGAAATGTTTGAGACGGGCTCGCGAAAACCAGGTCATAGTCAAGTCGGTGATTACCTACTTTGACGAAGAGCTGCAGAATGGGGTTGAAGTGGGGGCGTATGTGAAGACATTGCAGGAGCTCAAGAATTTTAAGGATGCTGGGGACCCCTTTACAGAGGACTTTTACTCGTTGTTTCAGTCAACTTATACGCAGCAGGCATTGATGCTGCAGAAGCTGCAAATCAGAAAGAGAAAGCTTGATAAGAAATTTAAATCACTGAAGACTTGGAAGAGGGTCTCAAATGCCATTTTCGTGGCTGCTTTCGTTTCTGTGTTGATTTTCTCAGTGGTAGCAGCTTCTGTTGCTGCGCCACCAGTAGTAACAGCTTTAGCTGCTGCCATGGCTGTTCCAATAGGGTCAGTAGGAAAGTGGTGTAACTCACTTTTTAAGCGATACAAGAAAGCTCTAATGAAACAACGGGAGGTAATCAGCTCAATGCAGGTTGGTACTTACATTTCATTGAAGGACTTGGACAACATTCGGGTTCTTACCGACAAATTGGAATTACAGCTTGAGTCATTATTGCAGAATGCTGATTTTGCTCTTAGAAACGAGGATGTTATTAAGATTGCAATAGACGAGATTAAGAAGAACATAGAAACTTTTTCAGAGACCATGGATACTTTAAGCGCACATGCTGATAAATGTAGTAGACAGATAAGGAGAGCAAGGACTGTGGTTATTCAAAACATAGTTAAAAAACCTGATTAA 1131 0.4297 MGGQSSKMSSVDAPTSINMGTHSLYAADLSSYEAACVKDPSLQSFDATIQGHTNRVISSLAHGVEVRSLSFDSLREVTDSLLEMNQEVVKVILDCKKDIWGNKELFALVNDYFDNSLQTLEFCNSLEKCLRRARENQVIVKSVITYFDEELQNGVEVGAYVKTLQELKNFKDAGDPFTEDFYSLFQSTYTQQALMLQKLQIRKRKLDKKFKSLKTWKRVSNAIFVAAFVSVLIFSVVAASVAAPPVVTALAAAMAVPIGSVGKWCNSLFKRYKKALMKQREVISSMQVGTYISLKDLDNIRVLTDKLELQLESLLQNADFALRNEDVIKIAIDEIKKNIETFSETMDTLSAHADKCSRQIRRARTVVIQNIVKKPD* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3246 376 PANTHER UPF0496 PROTEIN 3-RELATED 1 373 IPR007749 -
Lja4g3246 376 Coils Coil 297 324 - -
Lja4g3246 376 Pfam Protein of unknown function (DUF677) 42 371 IPR007749 -
Lja4g3246 376 PANTHER UPF0496 PLANT-LIKE PROTEIN 1 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3246 Lja-Chr4 61169510 61171341 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3246 - - gmx:100782901 588.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0413 2 3777910 3779763 Lja4g3246 4 61169510 61171341 ECH
Lja4g3246 4 61169510 61171341 Lja4g3246 4 61169510 61171341 ECH