Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0413 ATGGGGGGTCAGTCCAGCAAAATGACTACTAGCACTGAGGTTCCAACACCCATCCAAATGGGTACACATTCTCTGTATGCTGCTGATTTGAGCTATTATGAAGCTGCATGTGTTGAGGATCCAAACTTGCAATCCTTCGACGCTACCATTCAGGAGCGAACCAATAGGGTGATAAGCTCTCTTGCTAGTGGGGTTGAGGTTCATTCCATATCTATTGACTCACTAGGAGAAGTCACTGGTAGTCTTCTTGAAATGAACCAGGAAGTTGTCAAGGTCATTCTCGAGTGCAAGCAAGATATATGGAACAAGAAGGACCGGGATTTATTCTCCTTGGTGGATGATTTTTTTGAGAACAGTCTTCAGACATTGGAGTTCTGCAATGCTCTTGAGAAATGCTTGAAACGAGCGCGTGAAAAACTGGTTATTGTTAAGTCTGCAATGACTTATTTTGAGGACGAGGCGCAGAATGAGGTTGGAGGGTCAACTTATGTAAAGACATTGCAAGGGCTTAAGGATTTCAAGGAAGCTGGGGACCCTTTTACTGAAGAGTTTTATTCCTTGTTTCAATCAGTGTTTGCACAACAGGTATCAATGCTGAAGAAATTGCAATCTAGAAAGCACAAGCTTGATAAGAAGTTGAAATCCCTCAAGACATTGAAGAGGGTGTCAAGTGTCATTTTCGTGGCTGCTTTTGTCTCTGTGTTGATTTTCTCAGTGGTGGCAGCTGCAATTGCTGCACCACCTGTGATAACGGCTCTGGCTGGTGCGTTGGCTGTTCCGATAGGCTCAGTGGGAAAATGGTGTAACTCACTCTTTAAGAAATATGAGACAGCTCTGAAGGGCCAACGAGAAGTAATCAATTCAATGCAGGTTGGTACTTACATTCAATTGGTGGACTTGAAAAACATCCGGGTTCGAATCGAGCAATTGGAAATAAAGATGGAATCCATGTTGCAAAATGCTGATTTTGCTCTTACAAATGAGGATGGTGTAAGGTTTGCAATTGATGAGATTAAGAAGAAAATAGAAACTTTTGCGGATATCATTGATTCTTTGAGTGAGCAAGCTGATCAATGTAGTCGTCAGACAAGGAAAGCAAGGACAGTGGTTATACAAAAGATTATTAAATATTCTGGTTGA 1140 0.4193 MGGQSSKMTTSTEVPTPIQMGTHSLYAADLSYYEAACVEDPNLQSFDATIQERTNRVISSLASGVEVHSISIDSLGEVTGSLLEMNQEVVKVILECKQDIWNKKDRDLFSLVDDFFENSLQTLEFCNALEKCLKRAREKLVIVKSAMTYFEDEAQNEVGGSTYVKTLQGLKDFKEAGDPFTEEFYSLFQSVFAQQVSMLKKLQSRKHKLDKKLKSLKTLKRVSSVIFVAAFVSVLIFSVVAAAIAAPPVITALAGALAVPIGSVGKWCNSLFKKYETALKGQREVINSMQVGTYIQLVDLKNIRVRIEQLEIKMESMLQNADFALTNEDGVRFAIDEIKKKIETFADIIDSLSEQADQCSRQTRKARTVVIQKIIKYSG* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0413 379 Coils Coil 300 327 - -
Lja2g0413 379 Coils Coil 335 355 - -
Lja2g0413 379 PANTHER UPF0496 PROTEIN 3-RELATED 1 377 IPR007749 -
Lja2g0413 379 Pfam Protein of unknown function (DUF677) 43 374 IPR007749 -
Lja2g0413 379 Coils Coil 199 219 - -
Lja2g0413 379 Gene3D - 86 372 - -
Lja2g0413 379 PANTHER UPF0496 PLANT-LIKE PROTEIN 1 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0413 Lja-Chr2 3777910 3779763 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0413 - - gmx:100819451 556.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0413 2 3777910 3779763 Lja4g3246 4 61169510 61171341 ECH
Lja2g0413 2 3777910 3779763 Lja2g0413 2 3777910 3779763 ECH