Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3229 ATGGCTTTGAAAGTTAGAAACAAGACTTCAGGAGCATTGGTAACAGCTACATGGATTGTCTCGTGGAGCCTTATCATGATCTATAATGTCAGTTCAGCAAAGAGAGTTTTGGAAGAACCAAAATCAGAAAGCTTTGTTCTGAAACAAAAACAAGGAGCTGTGGTTGGAGTGTTTGATTTCTTCTGGAAGAGTGGAGAGTCTTCCTATGAACGTGTTTGGCCTGAAATGAAGTTCGGTTGGAGAATAATAGTAGGATCAATTGTTGGATTTTTCGGAGCAGCGCTAGGTAGTGTTGGCGGGGTTGGAGGCGGAGGAATTTTTATCCCTATGCTCACTTTGATCATTGGTTTTGACCCCAAGTCTTCTACAGCCATTTCTAAGTGTATGATTACAGGAGCAGCAGGGTCAACTGTGTATTACAATCTGAGGCTTAGGCACCCAACTTTAGACATGCCACTTATAGATTATGATCTGGCTTTGCTCTTCCAGCCTATGCTAATGTTAGGAATAAGCATTGGTGTTGCGTTTAATGTCATGTTTGCTGATTGGATGGTGACGGTTTTGCTTATCATCCTATTCATTGGCACATCCACAAAAGCTTTATCCAAAGGCTTAGATACATGGAAAAAGGAAACAATTATGAAGAAGGAAGCAGCCAAGATGTTGGAATCAGATCCTGGTTATGTTTCTGAAGAAGAGTACAAGACATTACCAAGTGGTTCAGCTGAACCACAAGATGAGGAGGTTCCTTTACTAAAGAACATTTACTGGAAAGAATTATCAGTCCTTGCATATGTCTGGGTGGCTTTTCTCATTGTTCAGATTATAAAGACATACAGCAAAACTTGCTCCATACAGTACTGGATTCTTGAATCCTTACAGGTTCCTATTGCAATATCTGTTACACTTTATGAAGCCATATGCTTATGCAAAGGAACTAGAGTGATTGCATCAAAGGGAAAAGAAATCACAGATTGGAAGTTTCATAAGATCTGTCTTTACTGCTCCTGTGGAATAATAGCTGGTATGGTCAGTGGACTGCTTGGTCTGGGAGGTGGCTTCATTCTTGGACCATTGTTTCTGGAATTGGGAATTCCTCCTCAGGTAGCTAGTGCTACATCAACTTTTGCTATGGTTTTCTCTTCCTCCATGTCAGTGGTACAATATCACTTGCTAGATCGCTTCCCTGTGCCTTATGCTGCATACTTTGTTCTGGTCGCGACCATAGCTGCATTAACTGGCCAGCATGTGGTGAGAAAGATAGTTGCTATCTTCGGCCGAGCATCCATCATCATCTTCATACTAGCATTCACCATTTTTGTCAGTGCAATCAGTTTAGGTGGGGTGGGAATAGAGAACATGGTTGAGAAGTTGGAAAATGAAGGGTATATGGGGTTTGAAAACATCTGCCATCAATCTTAG 1422 0.4142 MALKVRNKTSGALVTATWIVSWSLIMIYNVSSAKRVLEEPKSESFVLKQKQGAVVGVFDFFWKSGESSYERVWPEMKFGWRIIVGSIVGFFGAALGSVGGVGGGGIFIPMLTLIIGFDPKSSTAISKCMITGAAGSTVYYNLRLRHPTLDMPLIDYDLALLFQPMLMLGISIGVAFNVMFADWMVTVLLIILFIGTSTKALSKGLDTWKKETIMKKEAAKMLESDPGYVSEEEYKTLPSGSAEPQDEEVPLLKNIYWKELSVLAYVWVAFLIVQIIKTYSKTCSIQYWILESLQVPIAISVTLYEAICLCKGTRVIASKGKEITDWKFHKICLYCSCGIIAGMVSGLLGLGGGFILGPLFLELGIPPQVASATSTFAMVFSSSMSVVQYHLLDRFPVPYAAYFVLVATIAALTGQHVVRKIVAIFGRASIIIFILAFTIFVSAISLGGVGIENMVEKLENEGYMGFENICHQS* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3229 473 PANTHER CEREBLON 15 471 - -
Lja4g3229 473 PANTHER PROTEIN, PUTATIVE-RELATED 15 471 - -
Lja4g3229 473 Pfam Sulfite exporter TauE/SafE 336 441 IPR002781 GO:0016021
Lja4g3229 473 Pfam Sulfite exporter TauE/SafE 75 196 IPR002781 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3229 Lja-Chr4 60948978 60954066 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3229 - - gmx:100816633 739.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3229 4 60948978 60954066 Lja4g3229 4 60948978 60954066 ECH
Lja2g0448 2 4085319 4089406 Lja4g3229 4 60948978 60954066 PCT