Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0448 ATGGCTACAGCAACATGGCTGGCCTTGTGTATCCTTGTTATAATCTGCAATGTGAGCTTAGCAGATAGAGTTTTGAAAGAAAAAGAATCAGGAAATTTTGCTGAGGAAGAAAGTCAGGGAGTTCTAAAAGGGATGATCAATTTCTTATGGCAGAGTGGAAAGTCTTCCTATGAACCTGTTTGGCCTGAAATGGAGTTTGGTTGGAGAATTATAGTGGGATCAATCATTGGATTTTTGGGAGCTGCGTTGGGGAGTGTTGGAGGGGTAGGAGGTGGAGGAATTTTTGTCCCTATGCTTGCTTTGATCATTGGCTTTGACCCCAAGTCTTCTACAGCCATTTCCAAGTGTATGATTATGGGTGCATCTTTATCAACTGTATACTACAATCTGAGGCTTAGACACCCAACACTAGAAATGCCGCTTATAGATTATGACCTGGCCATGCTTTTCCAGCCAATGCTGATGCTTGGAATTAGCATCGGTGTTATATGTAATGTCATGTTTGCTGATTGGATGGTCACAGTTTTGCTTATCATCCTGTTCATAGGTACATCAACAAAAGCTACATTCAAAGGCATAGCTACATGGAAAAAGGAAACAATGATTAAAAAGGAAGCTGCTAGGCAATTGGAAGTTGAATCAAAACCTGGTGATGCTTCTGCAGAAGACTACAAGCCACTACCAAGTGGTCCAGCTGATTCCCATGTTGAAAAGGTCCCTTTACTGAAGAACATTTATTGGAAAGAATTATCACTCCTTGTGTATATCTGGGTGGGTTTTCTCCTTGTTCAGATTGCCAAGACGTACTTCAAGACTTGCTCCGTCCAGTACTGGATTCTTAATTTCTTGCAGGTTCCTATTGCGATCTCTGTTGCGCTTTTTGAAGCCATATGCTTATACAAAGGAACTAGAGTGATTGGATCAAAGGGAAAGGAAATTACATGTTGGAAGGTTCATCAAATTTGTCTCTATTGTTCCTGTGGAATTATAGCTGGTATGGTTGGTGGATTGCTTGGTTTAGGAGGTGGCTTCATTTTGGGGCCAGTGTTTCTAGAATTGGGAATTCCTCCTGAGGTAGCAAGTGCAACATCAACTTTTTCCATGCTTTTTTCATCCTCCATGTCAGTGGTGCAATATTACATTTTAGACCGTTTCCCAGTACCCTATGCTGCTTACTTTTCTTTGGTTGCAACCATAGCTGCCTTGGCTGGCCAACATGTGCTGAGAAAGATAATTGCAATCCTTGGCCGAGCATCCATTATCATCTTCTTACTTGCTTTGACTATTTTCATAAGCGCAATCAGCTTAGGTGGGGTGGGAATAGAGAACATGATTGAGAAGATGGAGAACCATGAGTATATGGGGTTTGAAAACCTCTGCGATCATTCTTAG 1392 0.4159 MATATWLALCILVIICNVSLADRVLKEKESGNFAEEESQGVLKGMINFLWQSGKSSYEPVWPEMEFGWRIIVGSIIGFLGAALGSVGGVGGGGIFVPMLALIIGFDPKSSTAISKCMIMGASLSTVYYNLRLRHPTLEMPLIDYDLAMLFQPMLMLGISIGVICNVMFADWMVTVLLIILFIGTSTKATFKGIATWKKETMIKKEAARQLEVESKPGDASAEDYKPLPSGPADSHVEKVPLLKNIYWKELSLLVYIWVGFLLVQIAKTYFKTCSVQYWILNFLQVPIAISVALFEAICLYKGTRVIGSKGKEITCWKVHQICLYCSCGIIAGMVGGLLGLGGGFILGPVFLELGIPPEVASATSTFSMLFSSSMSVVQYYILDRFPVPYAAYFSLVATIAALAGQHVLRKIIAILGRASIIIFLLALTIFISAISLGGVGIENMIEKMENHEYMGFENLCDHS* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0448 463 PANTHER CEREBLON 7 460 - -
Lja2g0448 463 Pfam Sulfite exporter TauE/SafE 75 188 IPR002781 GO:0016021
Lja2g0448 463 Pfam Sulfite exporter TauE/SafE 326 431 IPR002781 GO:0016021
Lja2g0448 463 PANTHER PROTEIN, PUTATIVE-RELATED 7 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0448 Lja-Chr2 4085319 4089406 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0448 - - gmx:100801441 708.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0448 2 4085319 4089406 Lja2g0448 2 4085319 4089406 ECH
Lja2g0448 2 4085319 4089406 Lja4g3229 4 60948978 60954066 PCT