Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3165 ATGGCGGCACCACCACCACCAACGACGTCGTTTTTATCGCCGACGCAGAGGTACGCCGCCGCAGCATTGTTCGGCCTCGCTCTTCACGAAGCCCAGGTTAACCAGACTCATCCACTAGCCTCACCCGCTTCCGAGAACTCTTCTTCCCTCTCTGAGGAGCGAACCAGTAGTGGCTCCAGCAGTGATTCAGTTTCCGATGACCCCGATCTTTGGGTCCACCGCCGCTCCGGTTTGCTCCGCCCCGTTTTCAAGTTTCTAGATATTGATTCTGCTGCGTGGTGTGGGCTAGAGGAAACTGCTGGGGCGTCTGTAGCTACACATCATGTGGGACCATTTTTGAGATTGCTCTCAGAAGAATTTGATGATGATTCTTCTCAAAGGCTCGATCAAGAACTGGCCTTGTCGAAAGCGGTTGATGGTTTTTTACTTGACATGGAGAAAAACTTGGAGTCTTCTGAGTCTAAAAAAGAGAAGCTTCATGAATATAAGCATCAGTGTCTCGAAAAATTTTCAACTCCAGATGGTGAACCTAGTTCTGAAAAGATAGATTTAAACTTGGATATTCAGCAGGAGACAGAGGCCACCCCTTTTCTTGACTGTAAAGAGCCACCACAGCAAGGATTTGGTACTGGTGAGATTGATGAGAAACCAATTGAAGAAGCTATGATGCTGAGTGATCAGAGGAAAGTGACGGTTCTCTATGAACTTCTCACTGCTTGTCTTGCAAATTTGAGTGAAAATGACAAGGATTGTACCCGGAGAAGAAAGGGTTATGATGCTCGGCATCGTGTGGCTCTGCGGTTGCTTGCAACATGGTTTGATATCAAGTGGGCAAAAATGGAGGCCATTGAGACCATGGTTGCTTGTACTGCAATGGCTATCATGAAAGAGCAAGAAGCAGAGAAAGAAGAAACTCAGTCAAAAAAAGGCAAGTGGGCTAAACTGAAGCGTGGTGGTATTATTGGTGCGGCTGCATTAACTGGGGGAGCCTTGTTGGCTATTACTGGTGGGTTAGCTGCACCAGCAATTGCTGCAGGACTTGGTGCTTTGGCTCCAACTTTGGGCACTCTGATCCCTGTAATTGGAGCAAGTGGATTTGCTGCAGTTGCTGGTGCTGCTGGAACTGTTGCTGGTTCCGTTGCTGTTGCTGCATCGTTTGGAGCTGCTGGAGCTGGACTTACAGGAAGCAAAATGGCTAGGAGAATTGGCGATGTTGATGGGTTTGATTTCAAAGCTATAGGAGAAAACCATAACCAAGGCAGGCTAGGGGTTGAGATCTTGGTCTCTGGATTTGTCTTTGAGAAGGATGATTTTATAAGGCCATGGGATGGGCTGAATGACAACCTGGAGAGGTATGCGCTAGAGTGGGAAACTAAGAATCTAATTGCCGTGAGCACTGCAATTCAAGATTGGCTTACTTCAAGACTTGCGATGGAGCTGATGAAGCGAGGGGCAATGATGACTGTATTGAGCACACTTTTAGCTGCTTTGGCTTGGCCAGCTGTGTTACTTTCAGCAACTGATTTCATTGACAGTAAATGGACCATAGCTATTAACAGATCAAACAAAGCAGGAAAGTTGCTTGCTGAAGTATTATTAAAAGGATTGCAAGGAAATAGGCCAGTGACACTTGTAGGATACTCACTTGGGGCAAGAGTCATTTTCAAGTGCCTACAGTGTTTGGCTAAAACAGAAAATGGCGCTGAACTAGTAGAAAGAGTTGTACTTCTTGGAGCACCTATCCCAATACAGGATGAGAACTGGGAAGCTGCTAGAAAGATGGTAGCAGGAAGATTTATAAATGCTTATTCAAGGAATGACTGGATGCTTGGAATTGCCTTCCGTGCCAGTCTACTTACGAAAGGATTAGCTGGAATCCAACCAGTCCCTATTCCTGGGATACAAAATGTTGATGTGACTGATCACATCGAAGGCCATTCTTCTTATCTGTGGGCTACACAACCGATATTAGCACAACTTGAAATAGATACATATTATCCTGTCTATAACAGTATTTCTTGTATATAG 2028 0.4566 MAAPPPPTTSFLSPTQRYAAAALFGLALHEAQVNQTHPLASPASENSSSLSEERTSSGSSSDSVSDDPDLWVHRRSGLLRPVFKFLDIDSAAWCGLEETAGASVATHHVGPFLRLLSEEFDDDSSQRLDQELALSKAVDGFLLDMEKNLESSESKKEKLHEYKHQCLEKFSTPDGEPSSEKIDLNLDIQQETEATPFLDCKEPPQQGFGTGEIDEKPIEEAMMLSDQRKVTVLYELLTACLANLSENDKDCTRRRKGYDARHRVALRLLATWFDIKWAKMEAIETMVACTAMAIMKEQEAEKEETQSKKGKWAKLKRGGIIGAAALTGGALLAITGGLAAPAIAAGLGALAPTLGTLIPVIGASGFAAVAGAAGTVAGSVAVAASFGAAGAGLTGSKMARRIGDVDGFDFKAIGENHNQGRLGVEILVSGFVFEKDDFIRPWDGLNDNLERYALEWETKNLIAVSTAIQDWLTSRLAMELMKRGAMMTVLSTLLAALAWPAVLLSATDFIDSKWTIAINRSNKAGKLLAEVLLKGLQGNRPVTLVGYSLGARVIFKCLQCLAKTENGAELVERVVLLGAPIPIQDENWEAARKMVAGRFINAYSRNDWMLGIAFRASLLTKGLAGIQPVPIPGIQNVDVTDHIEGHSSYLWATQPILAQLEIDTYYPVYNSISCI* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3165 675 PANTHER TRANSMEMBRANE AND COILED-COIL DOMAIN-CONTAINING PROTEIN 4 TMCO4 8 671 IPR007941 -
Lja4g3165 675 SUPERFAMILY alpha/beta-Hydrolases 522 667 IPR029058 -
Lja4g3165 675 Pfam Protein of unknown function (DUF726) 314 662 IPR007941 -
Lja4g3165 675 Gene3D alpha/beta hydrolase 474 661 IPR029058 -
Lja4g3165 675 MobiDBLite consensus disorder prediction 35 66 - -
Lja4g3165 675 PANTHER TRANSMEMBRANE/COILED-COIL PROTEIN (DUF726) 8 671 - -
Lja4g3165 675 MobiDBLite consensus disorder prediction 35 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3165 Lja-Chr4 59812522 59820431 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3165 - - cam:101513647 961.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3165 4 59812522 59820431 Lja4g3165 4 59812522 59820431 ECH
Lja2g0522 2 4709831 4715640 Lja4g3165 4 59812522 59820431 PCT