Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0522 ATGATGGCGGCGACGTCGTATCTGACGCCGACGCAGCGCTACGCTGCCGGAGCATTGTTCAGCCTGTCTCTGCACCAAGCCCACCTTCACCAAACCCACCCGCTTGGCCTTTCAACCCACGATGAATTCCCTTCTCCCTCCACATCTTCTTCTACTCCCTTTTCCGTTTCCGAGGATCCCAACCTCTGGGTCCACCGCACTTCCGGTTTGCTCCGCCCTGTTTTCATGTTTCTGGAAATTGAACCTGGAGCATGGTCTGGACTTGAGGAAACTGCTGGCTCTACTTCAGCTTCCCGTCACGTTGGACCGTACTTGAGACTATTATCAGAAGAATTTGATATTGATGAAGATGGTGATTGTCAAAGGGCAGATCAAGAACTTGCTTTGTCAGAAGCTGTTGATGCTATGGTGCTTAGCCTGGAAAAAAATGCACAGGCTTCCAGGGCGAAACGAGAGAAGTTTCGCGAATATGAGAATCAATGTCGTGAAAAGGTTTCGACTGCTGATGTTCAATCAGACTCTGAGGAGGTAGACATTCATTTGGAAATTCAGAAGGAGACCGATAGCCCTTTGACTCCTTTCTTTGAATGTGAAGACGTACACGAGGGATCTGTTAATCATGACATTGATGAGAGTCCAATTGAGGAGGTGATGAAGCTCAGCTATCAGAGGAAAGTGGCAGTTCTATATCAACTTCTTTCTGCTTGTCTTTCGGACTTAGGTGAAAAAAACGTTAAATATAATCGGAGAATAAAAGGCTATGATGCTCGACATCGTGTGGCTCTACGGTTGCTGGCAACTTGGCTTGATATCAAGTGGGAAAAAATGGAGGCCATTGAGACTATACTAGCTAGTTCTGCAATGGCTTTCATTAAAGAGCAAGAATCAAATAAAGATGAAACTGAATCAAAAGAAAGCAAGTGGGCTAAATGGAAGCGAGGTGGCATTATTGGTGCTGCAGCGTTAACTGGGGGAACCTTGATGGCTATTACCGGTGGATTAGCTGCCCCAGCAATTGCTGCAGGACTTGGTGCTTTGGCTCCAACGTTGGGTACTTTGATCCCTGTAATTGGAGCAAGTGGATTTGCAGCAGCTGCTAGTGCTGCAGGAACTGTTGCTGGTTCTGTTGCTGTTGCTGCCTCCTTTGGAGCTGCTGGAGCTGGACTTACTGGAACCAAAATGGCTAGGAGAACTGGGGGTGTTGACGAATTTGAGTTCAAAGCTATAGGTGAAAACCATAACCAAGGCAGGCTTGGGGTTGAGATTTTGGTGTCTGGCTTTGTCTTTGAGGAGGAGGATTTTATAAGGCCATGGGAAGGACAGAATGACAACTTGGAGAGGTATGCACTGCAGTGGGAGTCCAAGCATCTCATTGCCGTGAGCTCTGCAATTCAAGATTGGCTTACTTCAAGAATTGCCACAGAGCTGATGAAGCAAGGCGCAATGATGACTGTCTTGCATGCACTTGTAACTGCATTTGCTTGGCCGGCTGCCTTACTTACAGTCACTGAATTCATAGACAGCTCATGGACAATGGCTATTGACAGGTCAGACAAGGCAGGAAAGTTGCTTGCTGAAGTTTTATTGGGAGGACTGCAGGGAAATAGACCCGTGACACTTGTAGGTTACTCACTTGGAGCAAGAGTTATTTTCAAGTGTCTTGAGTTTTTGGCTGAAACAGAATGCCACGCTGAACTGGTAGAAAGAGTTGTTCTGCTTGGAGCACCCATTGCAATCAAGGATGAGAATTGGAAGGCTGCTAGAAAGATGGTAGCAGGAAGATTTGTGAATGCATATTCAAGGAATGATTGGATGCTTGGAGTTGCTTTCCGTGCCAGTCTACTTACTCAAGGATTAGCTGGAATCCAGCCAATTGATATTCCTGGGATCCAAAATGTTGATGTAACAGGTCACATTGAAGGCCACTCCTCTTATTTGTGGGCTACACAAAAGATCTTAGATGAACTTGAAATGGATACATATTATCCCGTTTATAACAGTATTCTTGTCATACAGTAA 2019 0.4586 MMAATSYLTPTQRYAAGALFSLSLHQAHLHQTHPLGLSTHDEFPSPSTSSSTPFSVSEDPNLWVHRTSGLLRPVFMFLEIEPGAWSGLEETAGSTSASRHVGPYLRLLSEEFDIDEDGDCQRADQELALSEAVDAMVLSLEKNAQASRAKREKFREYENQCREKVSTADVQSDSEEVDIHLEIQKETDSPLTPFFECEDVHEGSVNHDIDESPIEEVMKLSYQRKVAVLYQLLSACLSDLGEKNVKYNRRIKGYDARHRVALRLLATWLDIKWEKMEAIETILASSAMAFIKEQESNKDETESKESKWAKWKRGGIIGAAALTGGTLMAITGGLAAPAIAAGLGALAPTLGTLIPVIGASGFAAAASAAGTVAGSVAVAASFGAAGAGLTGTKMARRTGGVDEFEFKAIGENHNQGRLGVEILVSGFVFEEEDFIRPWEGQNDNLERYALQWESKHLIAVSSAIQDWLTSRIATELMKQGAMMTVLHALVTAFAWPAALLTVTEFIDSSWTMAIDRSDKAGKLLAEVLLGGLQGNRPVTLVGYSLGARVIFKCLEFLAETECHAELVERVVLLGAPIAIKDENWKAARKMVAGRFVNAYSRNDWMLGVAFRASLLTQGLAGIQPIDIPGIQNVDVTGHIEGHSSYLWATQKILDELEMDTYYPVYNSILVIQ* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0522 672 MobiDBLite consensus disorder prediction 35 58 - -
Lja2g0522 672 PANTHER TRANSMEMBRANE AND COILED-COIL DOMAIN-CONTAINING PROTEIN 4 TMCO4 4 667 IPR007941 -
Lja2g0522 672 SUPERFAMILY alpha/beta-Hydrolases 534 617 IPR029058 -
Lja2g0522 672 Gene3D alpha/beta hydrolase 459 658 IPR029058 -
Lja2g0522 672 Pfam Protein of unknown function (DUF726) 310 658 IPR007941 -
Lja2g0522 672 MobiDBLite consensus disorder prediction 41 58 - -
Lja2g0522 672 PANTHER TRANSMEMBRANE/COILED-COIL PROTEIN (DUF726) 4 667 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0522 Lja-Chr2 4709831 4715640 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0522 - - gmx:100782894 983.786
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0522 2 4709831 4715640 Lja2g0522 2 4709831 4715640 ECH
Lja2g0522 2 4709831 4715640 Lja4g3165 4 59812522 59820431 PCT