Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3131 ATGGCCGCGGAAATAGTAAAACAACTGCTCGCGAAACCGATCCAATTAGCGGACCAGGTCAGCAAAGCGGCGGAGGAAGGAAGCGCGTCGTTCAAGGTGGAGTGTTTAGAATTGAAATCCAAGACGGAGAAGCTCGCCGGACTTCTCCGTCAGGCGGCGCGTGCGAGCTCCGACCTCTACGAACGCCCCACACGGCGGATCATCGGAGATACTGAACAGGTTCTGGAAAGAGCGCTGACTTTAGTCCTCAAGTGCAAGGCCAACGGCCTCATGAAGCGCGTGTTCAGCATCGTCCCCGCCGCCGCGTTCCGCAAGATGTCGTCGCATCTCGAGAATTCAATCGGCGATGTTTCCTGGCTCCTACGTGTCTCCGCTCCCGCGGAGGAGCGCGGCGGGGAGTATCTTGGACTTCCGCCCATCGCCGCCAACGAGCCTATTTTGGGACTCATCTGGGAGCAGGTTGCGACGCTTCATACTGGCTCCCTTGATGAACGCTCCGACGCGGCGGCGTCGCTGGTGTCGCTGGTTCGCGATAACGACCGCAACGCGAATCTGATCATAGAGGAAGGTGGGGTTGGACCGTTGCTGAAGCTTATCAAGGAAGGGAAGAAGGAAGGTCAGGAGAATGCTGCTAAAGCAATTGGGCTTCTCGGCCGGGACGCGGAGAGCGTGGAGCACATGGTTCATGCTGGTGTTTGCTCGGTTTTCGGGAAGATTCTCAAGGAGGGACCGTTGAAGGTGCAAGCTGAGGTTGCCTGGGCTGTTTCTGAGCTTGCTACTAAGTACCCCAAATGCCAAGATCTCTTTGCTCAGCATCACATTGTTCGATTGCTTGTGAGCCATCTCGCGTTTGAAACGGTTCAGGAGCATAGTAAGTACTCCATTGTTACGAAATCGATCCACGCGGTTGTGATCGCGAGTAGCAATAACAACAACGGTTCTAACAATGAGGTGAAGAAGGAGAAGAAGGAAGAAGAGGATGAGGATGAGAAGGAGGTGAAGAGTCGGATACAGCATCCCTTGGCTGATAAGTCCCAAAATCAGATGCTTAAAGTGGTCACAAGTACAATGGCAATGCATGCTAGTTCCAACAAGAACTCCAACCAAGGCAATGAGACGACTCAAACGAGTCAAAACTCGTCACAAACACCGGCTAAGCAGAGCTATTCCTATTCTGGGATTAACATGAAGGGAAGGGAGCTTGAAGACCCTGAGGTTAAGGCTAAGATGAAAGCAATGGCAGCAAGGGCCTTGTGGTGTTTAGCCAAGGGTAACTCTTCCATTTGTCGCAGCATAACGGAATCGAGGGCTTTGTTGTGCTTTGCCATTCTCCTTGAGAAAGGGTCTAGAGATGTCAAGTACAATTCAGCCATGGCAGTGATGGAGATCACTGAAGTGGCTGAGAAAGATCCTGAGTTGAGAAGATCAGCATTCAAGCCCAACTCTCCTGCTTGCAAAGCAGTTGTTGATCAAGTGCTCAAGATCATCGACGAAGAAGACACGGACCTCCTAATCCCCTGCCTAAAAGCTATTGGGAGTTTAGCAAGGACATTCAGAGCTACAGAGACGAGGATCATCGGTCCCTTGGTTCGGCTTCTGGATGAAAGAGAGGCAGAGGTGACAAGAGAGGCTACAATCTCCCTCATGAAATTCGCCTGCACCGAGAACTACCTCCACATTGATCACTCCAAGGCGATTATAACTGCAGGTGGTGCAAAACACCTGGTCCAGCTGGTGTATCTTGGAGAGCACACAGTTCAAGTTCCAGCATTGTTTCTTCTCTCGTACATTGCTCTGCATGTTGCTGACAGTGAGGAGCTTGCTCGGGCTGAGGTGCTCGCAGTGCTTGAATGGGCATCCAAGAGACCTAACATGACCCAAGATGAAACGCTTGAGGCATTGTTGCATGAGTCCAAGAGTAGGTTGGAGCTTTACCAGTCTAGAGGTTCGAGAATGTTCCAAAAATGA 1968 0.5152 MAAEIVKQLLAKPIQLADQVSKAAEEGSASFKVECLELKSKTEKLAGLLRQAARASSDLYERPTRRIIGDTEQVLERALTLVLKCKANGLMKRVFSIVPAAAFRKMSSHLENSIGDVSWLLRVSAPAEERGGEYLGLPPIAANEPILGLIWEQVATLHTGSLDERSDAAASLVSLVRDNDRNANLIIEEGGVGPLLKLIKEGKKEGQENAAKAIGLLGRDAESVEHMVHAGVCSVFGKILKEGPLKVQAEVAWAVSELATKYPKCQDLFAQHHIVRLLVSHLAFETVQEHSKYSIVTKSIHAVVIASSNNNNGSNNEVKKEKKEEEDEDEKEVKSRIQHPLADKSQNQMLKVVTSTMAMHASSNKNSNQGNETTQTSQNSSQTPAKQSYSYSGINMKGRELEDPEVKAKMKAMAARALWCLAKGNSSICRSITESRALLCFAILLEKGSRDVKYNSAMAVMEITEVAEKDPELRRSAFKPNSPACKAVVDQVLKIIDEEDTDLLIPCLKAIGSLARTFRATETRIIGPLVRLLDEREAEVTREATISLMKFACTENYLHIDHSKAIITAGGAKHLVQLVYLGEHTVQVPALFLLSYIALHVADSEELARAEVLAVLEWASKRPNMTQDETLEALLHESKSRLELYQSRGSRMFQK* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3131 655 Gene3D - 4 123 IPR036537 GO:0007166
Lja4g3131 655 Pfam Armadillo/beta-catenin-like repeat 179 216 IPR000225 GO:0005515
Lja4g3131 655 PANTHER ARMADILLO REPEAT ONLY 4 3 653 - -
Lja4g3131 655 MobiDBLite consensus disorder prediction 316 339 - -
Lja4g3131 655 Gene3D - 377 642 IPR011989 -
Lja4g3131 655 MobiDBLite consensus disorder prediction 340 394 - -
Lja4g3131 655 Gene3D - 150 339 IPR011989 -
Lja4g3131 655 SUPERFAMILY ARM repeat 156 626 IPR016024 -
Lja4g3131 655 MobiDBLite consensus disorder prediction 307 395 - -
Lja4g3131 655 PANTHER ARMADILLO REPEAT ONLY 2 3 653 - -
Lja4g3131 655 SMART arm_5 425 465 IPR000225 GO:0005515
Lja4g3131 655 SMART arm_5 559 599 IPR000225 GO:0005515
Lja4g3131 655 SMART arm_5 481 516 IPR000225 GO:0005515
Lja4g3131 655 SMART arm_5 220 260 IPR000225 GO:0005515
Lja4g3131 655 SMART arm_5 178 219 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3131 Lja-Chr4 59312270 59314790 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3131 - - gmx:100794693 967.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3131 4 59312270 59314790 Lja4g3131 4 59312270 59314790 ECH
Lja4g3131 4 59312270 59314790 Lja2g0557 2 5034049 5036683 PCT