Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3117 ATGGCGTCTGAAAACCCTAACCAGAAAAACTCCCTCTACCCAGAGGTCATAACAGATGATCCCAACCCGAACAATCCCACTTCCTCCTCTCTCTACCCCTCAATCGACGTCTCCGAGCTCGTCGAAAATCTCTTCCCGGAAGACACCAGCCCCTCCGCCCCTCCGATCGCCGCCGAAGATGTTCTCATCAAGGTCCCCGGCGCTATTCTCCATCTAATCGACAAGGAGTACAGCGTCGAGCTTGCCTGCGGTGATCTCACCATCATTTGCCTCCGTCAGGGGAAAAACGTCGTCGCTATTTACGCCCGCGTCGATGACGAGATCCAGTGGCCGCTTGCTAAGGATGAGACCGCCGTTAAGGTTGATGATTCACATTACTTTTTCTCCTTCCGAGTTCCGAAAGAGGTTGATGATGATGATTCCGATTCGAGCGATGAGGAAGGGGGAAAAGGAGAAAAGCGCCACCGTCGCCGTCGTCGTAGCCGGAAAGGAGGCGGTGATTTGGTAATGCTGAGCTACGGGTTGACGATCGCGGCGAAGGGGCAGGAGGGTTTGCTGAAGGAGCTGGATAGGGTTTTGCTAGAATGCAGCAATTTCTCTGTCCATGAGGTGTCGGAGAAGGCGAAGAAGAAAGGGGAGGCTCTGGATGGGTCGGTGGCGATGGAGATGACGCCATTGGAGTTGAGTACGGAGAAGGAGAAGAAGGAATTGATGGAGGAGAGGTGTGCGGCGTATTGGACCACATTGGCTCCCAATGTGGAGGACTATAGTGGACTCGCCGCGAGGCTCATCGCTCAAGGCTCAGGGCAGTTAGTTAAGGGGATTTTGTGGTGTGGCGATGTGACTGTGGAGAGGTTGAGGTGGGGGAATGAGATCATGAAGAAGAGGATGGGTCCTTCTTCTCAGGCGGAGATTAGTCCCCAAACTTTAAAGCGGATCAAAAGGGTTAAGAAAGTGACTAAAATGACAGAGAGTGTAGCGCATGGGGTCCTCTCTGGGGTTATAAAGGTGTCTGGATTTTTCACCAGTTCAGTGGCAAATTCAAAAGCGGGGAAGAAATTTTTCAGCCTTCTACCTGGCGAAGTTGTGCTTGCTTCATTGGATGGATTCAGCAAAGTGTGTGATGCCGTTGAAGTAGCAGGAAAAAGCGTCATGTCAACATCATCCACTGTCACAACCGAGCTTGTCAATCACAGATATGGAGAAGAAGCTGCCAAGGCAACAAGTGAAGGATTGGATGCTGCTGGTCATGCTGTGGGGACTGCATGGGCTGCTTTTAAGATACGCCAGGCTTTTAACCCTAAGAGTGTGCTAAAGCCTACCTCCCTGGCCAAATCTGCGGCTAAAGCTGCTGCTGAATTCAAGGCTAAACAATCTAAGTGA 1383 0.5155 MASENPNQKNSLYPEVITDDPNPNNPTSSSLYPSIDVSELVENLFPEDTSPSAPPIAAEDVLIKVPGAILHLIDKEYSVELACGDLTIICLRQGKNVVAIYARVDDEIQWPLAKDETAVKVDDSHYFFSFRVPKEVDDDDSDSSDEEGGKGEKRHRRRRRSRKGGGDLVMLSYGLTIAAKGQEGLLKELDRVLLECSNFSVHEVSEKAKKKGEALDGSVAMEMTPLELSTEKEKKELMEERCAAYWTTLAPNVEDYSGLAARLIAQGSGQLVKGILWCGDVTVERLRWGNEIMKKRMGPSSQAEISPQTLKRIKRVKKVTKMTESVAHGVLSGVIKVSGFFTSSVANSKAGKKFFSLLPGEVVLASLDGFSKVCDAVEVAGKSVMSTSSTVTTELVNHRYGEEAAKATSEGLDAAGHAVGTAWAAFKIRQAFNPKSVLKPTSLAKSAAKAAAEFKAKQSK* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3117 460 MobiDBLite consensus disorder prediction 135 163 - -
Lja4g3117 460 PANTHER SPARTIN 1 460 IPR045036 -
Lja4g3117 460 MobiDBLite consensus disorder prediction 1 30 - -
Lja4g3117 460 Pfam Senescence domain 263 449 IPR009686 -
Lja4g3117 460 PANTHER SENESCENCE/DEHYDRATION-ASSOCIATED-LIKE PROTEIN 1 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3117 Lja-Chr4 58932014 58936532 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3117 K19366 - gmx:100777392 642.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3117 4 58932014 58936532 Lja4g3117 4 58932014 58936532 ECH
Lja2g0564 2 5098041 5101368 Lja4g3117 4 58932014 58936532 PCT