Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0564 ATGGCTACTCAAAACCCTAACCGTCGAAATTCCCTCTACCCCGAAGTAATCGATTCCAACCCAGAAGCTCCACATCACTTCCATCAAGCAAACCACTCATCATCTTCTCAATCCTCCAACCTCTACCCTTCAATCGACTTCAACGACCTCGTTCAGAATCTCTTCCCGGACGACATCACCACCGCCACCGAGGAGATCCTCCTCAAGATCCCGGGTGCTATCCTCAACCTTATAGACAAAGACTACAGCGTCGAGCTCGCTTCCGGTGACCTCACCGTCACGCGTCTCCGCCAGGGCGACAACACCATCGCAGTCTACGCCCGTGTCGCTGACGAGATCCAATGGCCGCTCGCCAAGGACGAGACCGCTGTCAAACTCGACGACTCTCACTACTTCTTCTCCTTCACCGCCCCCAAGGGTTCCGATTCCGACGAGGAAGAGGAAGCGGGAAAGGGAAAGGGTTACAGCTCCGATTTGTTGAGCTACGGTTTGACGGTCGCGTCGAAGGGGCAGGAGCGTTTGCTGAAGGAGCTCGATGCGGTGCTGGAGAGCTGCAGTAGCTTCTCTGTGCAGAAGGTTTCTGAGAAGGTGAAGAGGAAAGGGGAGGCGCTAGATGGGTCGGTGGCGAGGGAGGTTTCGCCGAAGGATTTGGAGTCGTCGGCGACGAAGAAGGAGATGATGGAGGAGCGGAGTGCTGCGTATTGGACTACGCTGGCTCCGAATGTGGAGGATTATAGTAGTACTACTGCGAGGATGATTGCTGCAGGGTCTGGTCATGTGGTTAAGGGGATTTTGTGGTGTGGAGATGTGACGGTGGATAGGTTGAACTGGGGGAACAAGGTTATGAAGAAGAGGTTGTCTTCTGGTTCGCGTTCGGAGATTAGTCCTCAAACCTTGAAGCGGATTAGAAGGGTTAAGAGAGTGACAAGAATGACGGAGAAAGTGGCAAATGGGTTGCTCTCTGGGGTCGTGAAAGTGTCTGGATTCTTTACCAGTTCACTGGTAAATTCCAAAGTCGGAAAGAAATTTTTCAGCCTTCTACCAGGGGAAGTTGTGCTTGCATCATTGGATGGATTCAGTAAAGTGTGTGATGCTGTTGAAGTAGCTGGAAAAAATGTCATGTCAACGTCATCCACTGTGACAACTGAGCTTGTCGACCACAGATATGGGGAGCAAGCTGCTGAAGCAACAAGTGAAGGGCTTAATGCTGCTGGTCATGCTCTGGGTACTGCATGGGCTGCGTTTAAGATCAGGAAGGCTATTAACCCTAAGAGTGTTTTTAAACCCACCACACTGGCCAAGTCTGGTGCTAAAGCTGCAGCTAAAGCTGCAGCTTCTGATTTGAAGTCTAAAAAGTCCAAGTGA 1365 0.5143 MATQNPNRRNSLYPEVIDSNPEAPHHFHQANHSSSSQSSNLYPSIDFNDLVQNLFPDDITTATEEILLKIPGAILNLIDKDYSVELASGDLTVTRLRQGDNTIAVYARVADEIQWPLAKDETAVKLDDSHYFFSFTAPKGSDSDEEEEAGKGKGYSSDLLSYGLTVASKGQERLLKELDAVLESCSSFSVQKVSEKVKRKGEALDGSVAREVSPKDLESSATKKEMMEERSAAYWTTLAPNVEDYSSTTARMIAAGSGHVVKGILWCGDVTVDRLNWGNKVMKKRLSSGSRSEISPQTLKRIRRVKRVTRMTEKVANGLLSGVVKVSGFFTSSLVNSKVGKKFFSLLPGEVVLASLDGFSKVCDAVEVAGKNVMSTSSTVTTELVDHRYGEQAAEATSEGLNAAGHALGTAWAAFKIRKAINPKSVFKPTTLAKSGAKAAAKAAASDLKSKKSK* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0564 454 Pfam Senescence domain 252 438 IPR009686 -
Lja2g0564 454 PANTHER SENESCENCE/DEHYDRATION-ASSOCIATED-LIKE PROTEIN 1 454 - -
Lja2g0564 454 PANTHER SPARTIN 1 454 IPR045036 -
Lja2g0564 454 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0564 Lja-Chr2 5098041 5101368 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0564 K19366 - gmx:100804971 671.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0564 2 5098041 5101368 Lja2g0564 2 5098041 5101368 ECH
Lja2g0564 2 5098041 5101368 Lja4g3117 4 58932014 58936532 PCT