Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2660 ATGTCCTGCTTAGAGGTTTCCAAAGAGGGGAAGTTCAAAGAAGAAGCAGAGGAGGTTACTCTTGATGGGAGTGTTGATTGGCATGGCCGGCCTGCAATTAGAGCCAAATCAGGGAGATGGGTTGCTGGAACCATCATTCTCTTGAACCAAGGACTAGCAACCTTAGCATTCTTTGGAGTAGGAGTTAATCTAGTGCTGTTCCTGACAAGGGTGTTAGGACAAGACAATGCTGATGCTGCTAACAATGTGAGCAAGTGGACTGGCACAGTTTACCTCTTCTCTCTTGTGGGTGCTTTCCTCAGTGATTCTTATTGGGGAAGGTACAAAACTTGTGCCATCTTTCAAGGCATCTTTGTACTGGGTCTAGTATTCTTGTCCCTTTCATCATACCTCTCATTGCTTAGACCTAAAGGTTGTGGGAGTGAACTGCTTCACTGTGGGAAACATTCAAGCTTGGAGATGGGGATGTTCTACCTATCAATCTACCTCATTGCCTTAGGGAATGGAGGGTATCAACCAAACATTGCCACATTTGGAGCTGACCAATTTGATGAAGAGCACTCAAAGGAAGGTTACTCAAAGGTGGCATTTTTCAGCTACTTCTACCTGGCTCTGAACCTTGGTTCACTTTTCTCAAACACCATTCTGGGCTATTTTGAAGACGAAGGAATTTGGGCTCTTGGGTTCTGGGTCTCTGCAGGCTCTGCCTTTGCAGCACTTGTGTTGTTTCTTGTTGGGACACCAAGATATAGACACTTCAAACCTTGTGGCAATCCACTTTCAAGATTCTGCCAAGTCCTTGTTGCTGCATGGAGGAAATTGGGAGTTCAGATGACATCAAATGGAGAGGACTTGTATGTCGTGGATGAAGAGGAATCTTCCACCAACAGCAACAACAGAAAGATTATTCTCCACACCCATGGATTCAAGTTTCTGGATAGGGCAGCATACATATCTTCAAGAGATCTAGATGACAAGAAAGGAGGCTTTTACAATCCGTGGCGTCTCTGTCCTATAACTCAAGTTGAAGAAGTAAAGTGCATACTAAGACTTCTTCCAATTTGGCTATGCACCATAATCTACTCAGTAGTTTTCACACAAATGGCTTCTCTTTTCGTGGAGCAAGGTGCCGCCATGAAAACTACAATTTACCATTTCAGAATACCCCCAGCAAGCATGTCAAGCTTTGATATCCTCAGCGTAGCAGTCTTCATCTTCTTCTACCGCCGCGTCATCGATCCTCTTGTGGGAAAACTTAAAAAAACAAAATCCAAGGGACTCACTGAGCTTCAGAGGATGGGAATTGGGCTTGTCATAGCTGTAATGGCAATGGTTTCAGCAGGAATAGTCGAATGCTACAGGCTCAAGTACGCAAAACACGGCACAAGCTCTCTAAGCATCTTCTGGCAAGTTCCTCAGTACGCACTCGTAGGAGCATCTGAGGTTTTTATGTATGTAGGACAATTAGAGTTCTTCAATGCTCAAACACCAGAAGGGTTAAAGAGCTTTGGAAGTGCTCTTTGTATGACTTCAATCTCACTCGGGAACTATGTGAGTAGCATAATTGTTAGCATAGTTATGAAGATCTCCACTCAGGATCACATGCCAGGGTGGATCCCCGGCAACCTAAACAGAGGTCACCTAGATAGGTTTTTCTTCCTCTTAGCTGCATTGACATCACTGGACTTGATTGCTTACATTGCAGTCGCAAAGTGGTTCAAGAACATACAGACGGAATGCAAACATGACGAGGATGATAAGATTGGTAACTTAATTAAGGTCTAA 1785 0.4409 MSCLEVSKEGKFKEEAEEVTLDGSVDWHGRPAIRAKSGRWVAGTIILLNQGLATLAFFGVGVNLVLFLTRVLGQDNADAANNVSKWTGTVYLFSLVGAFLSDSYWGRYKTCAIFQGIFVLGLVFLSLSSYLSLLRPKGCGSELLHCGKHSSLEMGMFYLSIYLIALGNGGYQPNIATFGADQFDEEHSKEGYSKVAFFSYFYLALNLGSLFSNTILGYFEDEGIWALGFWVSAGSAFAALVLFLVGTPRYRHFKPCGNPLSRFCQVLVAAWRKLGVQMTSNGEDLYVVDEEESSTNSNNRKIILHTHGFKFLDRAAYISSRDLDDKKGGFYNPWRLCPITQVEEVKCILRLLPIWLCTIIYSVVFTQMASLFVEQGAAMKTTIYHFRIPPASMSSFDILSVAVFIFFYRRVIDPLVGKLKKTKSKGLTELQRMGIGLVIAVMAMVSAGIVECYRLKYAKHGTSSLSIFWQVPQYALVGASEVFMYVGQLEFFNAQTPEGLKSFGSALCMTSISLGNYVSSIIVSIVMKISTQDHMPGWIPGNLNRGHLDRFFFLLAALTSLDLIAYIAVAKWFKNIQTECKHDEDDKIGNLIKV* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2660 594 PANTHER PEPTIDE TRANSPORTER 15 583 - -
Lja4g2660 594 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 15 583 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lja4g2660 594 Pfam POT family 108 532 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lja4g2660 594 Gene3D MFS general substrate transporter like domains 11 582 IPR036259 -
Lja4g2660 594 SUPERFAMILY MFS general substrate transporter 31 583 IPR036259 -
Lja4g2660 594 CDD MFS_NPF7 40 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2660 Lja-Chr4 36199074 36206136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2660 1 586 Organic Solute Cotransporters AT1G32450 74.579 0.0 914
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2660 K14638 - gmx:100778608 1018.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2660 4 36199074 36206136 Lja4g2660 4 36199074 36206136 ECH
Lja2g0186 2 1594037 1600146 Lja4g2660 4 36199074 36206136 PCT