Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0186 ATGTCTTGCTCAGCGTTACCGGTCTGCCAAGAGGACCATTTCAAAGAAGAATCAGAAATCACTCTTGATGGAAGTGTTGATCTCCATGGCCGTCCTGCTATCAGAGCCAAATCTGGAAGATGGGTTGCTGGAATTATCATACTCTTGAACCAAGGTCTGGCAACCCTTGCATTCTTTGGGATCGGAGTGAACCTGGTGCTGTTCCTGACAAGGGTGGTGGGACAAAACAATGCTGAAGCAGCCAACAATGTGAGCAAGTGGACTGGAACTGTTTACATCTTCTCCCTTGTGGGTGCTTTCCTCAGTGATTCTTACTGGGGAAGATATAAAACTTGTGCTGTGTTTCAGGTCATCTTTGTGATAGGTCTAATGTCCTTATCCCTGTCATCATACCTCTTCTTGCTAAAACCTAAAGGTTGTGGGAAGGAATCACTTCAATGTGGGAAACACTCAAGTTTGGAGATGGGGATGTTCTACCTCTCAATCTATCTCATTGCCCTGGGGAATGGAGGTTATCAACCAAATATCGCCACATTTGGAGCTGATCAGTTTGATGAGGAGCACTCGAAAGAGGGTCGCTTAAAGGTGGCCTTCTTTAGCTACTTCTACCTAGCTCTGAACTTTGGGCAACTCTTCTCAAACACTGGTCTGGTATATTTGGAGGATGAAGGAATGTGGGCTCTAGGTTTCTGGGTGTCTGCAGGCTCTGCCTTTGCTGCACTGGTATTGTTCCTTGCAGGCACCAAAAGGTATAGACACTTCAAGCCCAGTGGAAACCCTCTCCCCAGGTTTTGCCAAGTCCTTGTCGCTGCATCGAGGAAATCGAGAGTTCAAATGCCATCAAATGGAGAGGACTTATTTAACTTGGATACAATGGAGTCTTCCACCAATGCCAATAGAAAAATCCTCCACACTCACGGATTCAAGTTCTTGGACAGGGCAGCGCTTATATCTTCAAGAGATGTAGTGGACCAGAAAGACGGCCGTTACAACCCCTGGCGGCTCTGTCCTGTAAGTCAAGTTGAAGAAGTGAAATGCATACTGAGACTTCTTCCAATATGGCTCTGTACTATAATATACTCCGTGGTTTTCACACAAATGGCTTCTCTTTTTGTGGAGCAAGGTGCTGTCATGGATTCCACTGTTTTCCATTTCAGAATACCAGCAGCTAGCATGTCTTGCTTTGATATCCTCAGTGTATGTCTCTTCATTTTCTTTTACCGTCGAGTTCTTGATCCATTTGTCGGAAAACTTAAAAAGTCAAACTCCAAGGGACTCACAGAGCTTCAGAGAATGGGGGTTGGACTTGTTATAGCTGTGATGGCAATGCTTTCAGCTGGAATAGTTGAGTGCTACAGGCTCAGGTATGCAAAACAAGAATGTACCGACTGTAAAGACACGAGCACTTTATCCATCTTCTGGCAAATCCCCCAGTACGCATTCATAGGAGCTTCTGAGGTGTTTATGTATGTAGGCCAGTTAGAGTTCTTCAATGCGCAGACACCAGACGGCTTAAAGAGCTTCGGAAGTGCACTTTGCATGACATCAATTTCCCTTGGGAACTACGTGAGTAGCTTAATTGTTAGCATAGTTATGAAGATCTCCACCGAGGATCATGTGCCAGGGTGGATCCCTGCAAACCTCAATAAAGGTCACCTAGACAGGTTTTTCTTCCTCTTAGCTGCCTTGACATCGATCGACTTGATCGCCTATATTGCATGTGCAAAGTGGTACAAGAATATACAACTGGATGAGAAACGTGGTGGAGAGAATAATGAGCCTGGTAGCTTCTCAGTCTGA 1800 0.4528 MSCSALPVCQEDHFKEESEITLDGSVDLHGRPAIRAKSGRWVAGIIILLNQGLATLAFFGIGVNLVLFLTRVVGQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRYKTCAVFQVIFVIGLMSLSLSSYLFLLKPKGCGKESLQCGKHSSLEMGMFYLSIYLIALGNGGYQPNIATFGADQFDEEHSKEGRLKVAFFSYFYLALNFGQLFSNTGLVYLEDEGMWALGFWVSAGSAFAALVLFLAGTKRYRHFKPSGNPLPRFCQVLVAASRKSRVQMPSNGEDLFNLDTMESSTNANRKILHTHGFKFLDRAALISSRDVVDQKDGRYNPWRLCPVSQVEEVKCILRLLPIWLCTIIYSVVFTQMASLFVEQGAVMDSTVFHFRIPAASMSCFDILSVCLFIFFYRRVLDPFVGKLKKSNSKGLTELQRMGVGLVIAVMAMLSAGIVECYRLRYAKQECTDCKDTSTLSIFWQIPQYAFIGASEVFMYVGQLEFFNAQTPDGLKSFGSALCMTSISLGNYVSSLIVSIVMKISTEDHVPGWIPANLNKGHLDRFFFLLAALTSIDLIAYIACAKWYKNIQLDEKRGGENNEPGSFSV* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0186 599 SUPERFAMILY MFS general substrate transporter 32 586 IPR036259 -
Lja2g0186 599 CDD MFS_NPF7 41 577 - -
Lja2g0186 599 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 16 587 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lja2g0186 599 Gene3D MFS general substrate transporter like domains 13 586 IPR036259 -
Lja2g0186 599 Coils Coil 598 599 - -
Lja2g0186 599 Pfam POT family 109 537 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lja2g0186 599 PANTHER PEPTIDE TRANSPORTER 16 587 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0186 Lja-Chr2 1594037 1600146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0186 1 586 Organic Solute Cotransporters AT1G32450 73.435 0.0 895
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0186 K14638 - gmx:100776457 1015.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0186 2 1594037 1600146 Lja4g2660 4 36199074 36206136 PCT