Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2658 ATGAAAGCAAGGAGAGGAAAACGCTCAGAGGCTTTTTGGCCTTCCATGGTGATGAAGAAATGGTTGAATATAAAGCCAAAGGTGTATGATTTTAGTGAAGATGAAGTGGACACTGAAACTGAGAGTGAAGATGAAGGTTGTTTCAATTTTCATCCAGCTTGCTCTCCTAAAGCTTCAAGAATGGGAGTGCGTGAAGATAATCCATTAAGAACAGAATCAATATTCTCAAGTCAAACATCAGATGCATCTTATAAGAAGTCCTACAAGATGAGACACAGAAGAGGAAACTCAGAAACTCTGCGTGCTCAGTACATAAATACTAAGGAAGTGAGAGTAACAGTTGGCACTTGGAATGTTGCTGGAAAGCATCCATGTAATGATCTTGAAATTGAGGACTGGCTCTGTACCAAAGAGCCAGCAGATATTTACATTATTGGTTTCCAAGAGGTAGTACCATTAAATGCTGGCAATGTACTGGGAGCTGAGGATAACACACCCATCTCAAAATGGGAGGCAATCATTCGAAAAACTCTAAACAAATCTTCTGAACCTAAAAGTAAACGCAAAAGCCACAGTGCCCCTACTTCTCCAACTGCTTCTGCTGATGTTCTACCAGACAACAATGGTGCTAATCCACTAGATAATATGATTAATGAAGAGTATTTAGTAGGTTTTGACAGTGATGAGCTAGAACAGGAGCAAGAGAAAAGCATAATCAGTTCTATAGGAAACAATTTGCAGTTGAAGAGAATACATGGCATTGATCTTCAGACCACACTTGACTGGCCTGAACGTCCATTAGATGCAAATGCAATTCCCCTCGCTGATTCGAGTCCAAAATTGCGTAGAGTACTAAGCAGTTCAGCTTTAATTGGCTTTAACTGGACAGATAATGCTGTGAAGTTTGCCAGTGGAATGAAACGTTCACACCAAAGTTCAGGAAACTTGACTTTGCTCTGGAAGGAGCAGCAGCAGCAAGTGGTGCCAGAAGTGTTTGATTCCCTTGCAGAAGTATCTGACATTGTGTTATCAGATGAGGAAGATGATACTTTTCTTGAATTACCTGATGAAGAAGATGCTAATGGAATAGGAACCGCGAAATCACATGAAATGTATGTCCGGATTGTCAGCAAGCAGATGGTGGGAATTTATGTTTCTGTTTGGGTGCAAAGGAGGTTGAGGAGGCACATTAATAATTTGAAGGTTTCTCCTGTTGGAGTTGGTATTATGGGCTACATGGGAAACAAGGGTTCTGTTTCAGTTAGCATGTCTCTCTTTCAGTCAAGGATGTGTTTTGTTTGTTCCCATCTGAGTTCTGGTCAGAAGGAAGGGGCAGAACATAGACGAAACTCAGATGTTCATGAAATTCTTCGACGCACTCGTTTCTCATCTGTCTTTGATGCAGACCAGCCTCAGACAATCCCATCTCATGATCAAATTTTCTGGTTTGGGGATTTGAATTATCGTATCAATTTGTTGGATGTGGAGGTTCGGAAGCTGGTAGCTCAAAAGAAATGGGATGAACTGATGAATTATGATCAGCTAAGCAATGAATTGCATAGTGGACATGTGTTTGATGGATGGAAAGAGGGGTTTGTAAACTTCCCACCTACTTACAAGTATGAATTCAATTCTGATAAATATGTTGGTGAGAACCCAAAAGAAGGAGAAAAAAAGAGATCACCAGCTTGGTGTGACCGAATATTGTGGCTAGGAAAAGGAATAAAGCAACTTCAATATGGGCGTTCAGAAAATAAGCTTTCAGATCATAGACCAGTTAGTGCAATCTTCAGTGTTGATGTTGAAGTATTTGACCACCGCAAGCTACAACGAGCTCTGAATTTCACCAATGCAGCAGTTCACCCAGGGGTTTTCCTTAAAGATGCAGCAGTGCATCCTGAGGTTTTCCTTACAGATGGGGACTTGTCATATTAG 1935 0.4088 MKARRGKRSEAFWPSMVMKKWLNIKPKVYDFSEDEVDTETESEDEGCFNFHPACSPKASRMGVREDNPLRTESIFSSQTSDASYKKSYKMRHRRGNSETLRAQYINTKEVRVTVGTWNVAGKHPCNDLEIEDWLCTKEPADIYIIGFQEVVPLNAGNVLGAEDNTPISKWEAIIRKTLNKSSEPKSKRKSHSAPTSPTASADVLPDNNGANPLDNMINEEYLVGFDSDELEQEQEKSIISSIGNNLQLKRIHGIDLQTTLDWPERPLDANAIPLADSSPKLRRVLSSSALIGFNWTDNAVKFASGMKRSHQSSGNLTLLWKEQQQQVVPEVFDSLAEVSDIVLSDEEDDTFLELPDEEDANGIGTAKSHEMYVRIVSKQMVGIYVSVWVQRRLRRHINNLKVSPVGVGIMGYMGNKGSVSVSMSLFQSRMCFVCSHLSSGQKEGAEHRRNSDVHEILRRTRFSSVFDADQPQTIPSHDQIFWFGDLNYRINLLDVEVRKLVAQKKWDELMNYDQLSNELHSGHVFDGWKEGFVNFPPTYKYEFNSDKYVGENPKEGEKKRSPAWCDRILWLGKGIKQLQYGRSENKLSDHRPVSAIFSVDVEVFDHRKLQRALNFTNAAVHPGVFLKDAAVHPEVFLTDGDLSY* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2658 644 MobiDBLite consensus disorder prediction 178 210 - -
Lja4g2658 644 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 7 628 IPR045849 GO:0004445|GO:0046855
Lja4g2658 644 MobiDBLite consensus disorder prediction 59 78 - -
Lja4g2658 644 SUPERFAMILY DNase I-like 101 616 IPR036691 -
Lja4g2658 644 Gene3D Endonuclease/exonuclease/phosphatase 303 622 IPR036691 -
Lja4g2658 644 SMART i5p_5 293 605 IPR000300 GO:0016791|GO:0046856
Lja4g2658 644 MobiDBLite consensus disorder prediction 191 205 - -
Lja4g2658 644 Gene3D Endonuclease/exonuclease/phosphatase 90 195 IPR036691 -
Lja4g2658 644 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 2 7 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2658 Lja-Chr4 36083131 36089693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2658 372 642 Acyl Lipid Metabolism Gene Families AT1G65580 30.573 2.72e-36 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2658 K24221 - gmx:100807214 962.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0182 2 1575809 1580052 Lja4g2658 4 36083131 36089693 PCT