Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0182 ATGAAGGCAAGAAGAGGAAAACGCTCTGAGGCCTTTTGGCCTTCCATGGTGATGAAAAAATGGTTAAACATCAAGCCTAAGGTGAATGATTTTAGTGAAGATGAAGTTGACACTGAAACTGAGAGTGAAGATGATGCTTGCTCTCCTAAAGCTTCAAGAATGGCTGCGTGTGAAGATAATCCACTTAGAACACAAAGGACTCAATCCATATTGCAAAGTCAAATATCAAGTGCATCTTGTAAGGGCTACAAAACAAGACACCGAAGAGGAAAATCAGAAACTCTGCGTGCTCAGTACATAAAAACTAAGGAAGTGAGGGTAACAATTGGCACTTGGAATGTTGCTGGAAAAGTTCCATCTTTAGATCTTGAGATTGATGACTGGCTATGTACTGAAGAACCAGCTGATATTTACATTCTTGGTTTCCAGGAGGTAGTTCCACTGAATGCTGGAAATGTATTGGGAGCAGAGGATAATACACCTATTCACAAATGGGAGGAAATCATTCGAAGATCTCTAAACAAATCTTCTGAGCCTAATAGCAAAAAATTAAGCCAAAGTGCCCCTCCTTCACCAGTGTTAAGAACTTCTTCTGCTGATGATGTGCTAGCTGACAATATGGGTGCTGCTAATCCAATAGATATGATGAATGATGAGTATATAGGAAGAACTATTGACGATTTTGAGCTGAAACCGCGAGAAGTCAATAACATAATTGGTAGCATTAATCTTGACTGGCCTGAACGTCCGTTAGATGCAATCTCCCAAATTGTTGATTCCAATCCAAAGTTCAGGAGAGTCCTGAGCAGCTCAGCAAGAATTGGCTTTAACTTGACTGAGAATTCTTTGGTATATGGTGGAGGGTTGAAACGGTCACACAACAGTTCTGGAAATTTGGGTTTGTTATGGAAACAGCAACAGGTGATACCTGAAGTAGTTGATTCCTTAGCTGATGTCTGTGGCGTGTCACCCCCGGAGGATGATGACACTTTTCTTGACTTACCTGATAACCAAGATGATATAGAATTAGGTGGCGCCATGGACACACGTCCGAGGTATGTTCGGATTGTCAGCAAGCAGATGGTAGGGATATATGTATCTGTTTGGGTGCAGAGGAGGTTGAGAAGGCATATCAATAATCTTAAAGTTTCCCCTGTTGGGGTTGGCATTATGGGCTACATAGGAAACAAGGGTTCTGTCTCAGTTAGCATGTCTCTCTTTCAGTCACGCATGTGCTTTGTTTGTTCCCATCTGAGTTCTGGTCAGAAAGATGGAGCTGAACAGAGGCGAAACTCTAACGTTCATGAAATTCTAAGACGCACTTGCTTCTCATCTGTCTTTGATAGTGATCAACCACTAACAATACCATCTCACGACCAGATTTTCTGGTTCGGGGATTTGAATTACCGTATCAGTATGCTAGATGCAGAGGTTCGGAAATTGGTAGCTCTAAAAAAGTGGGATGAACTCATGAATTATGATCAGCTAAACAAAGAATTGCGTGTTGGGCGTGTATTTGATGGATGGAAAGAGGGGTTGATAAACTTCCCACCCACTTACAAGTATGAAATTAACTCAGATAGATATGTTGGTGAGTGCCCAAAAGAAGGGGAAAAGATGAGAGCTCCTGCATGGTGTGATCGTATATTATGGCTTGGGAAAGGAATTAAGCAACTAGAATATGGACGTTCAGAAATTAGGATCTCTGATCATAGACCTGTTAGTTCGATGTTCTTGGTTGAAGTTGAAGTGTTTGACCAACGCAAGCTAAAAATAGCTCTGAATTTCACTAATACTGCAGCAGTACACCCAGCGATTTTCACTGATGAAGATGGCGACATATTATCATCCTATTGA 1857 0.4136 MKARRGKRSEAFWPSMVMKKWLNIKPKVNDFSEDEVDTETESEDDACSPKASRMAACEDNPLRTQRTQSILQSQISSASCKGYKTRHRRGKSETLRAQYIKTKEVRVTIGTWNVAGKVPSLDLEIDDWLCTEEPADIYILGFQEVVPLNAGNVLGAEDNTPIHKWEEIIRRSLNKSSEPNSKKLSQSAPPSPVLRTSSADDVLADNMGAANPIDMMNDEYIGRTIDDFELKPREVNNIIGSINLDWPERPLDAISQIVDSNPKFRRVLSSSARIGFNLTENSLVYGGGLKRSHNSSGNLGLLWKQQQVIPEVVDSLADVCGVSPPEDDDTFLDLPDNQDDIELGGAMDTRPRYVRIVSKQMVGIYVSVWVQRRLRRHINNLKVSPVGVGIMGYIGNKGSVSVSMSLFQSRMCFVCSHLSSGQKDGAEQRRNSNVHEILRRTCFSSVFDSDQPLTIPSHDQIFWFGDLNYRISMLDAEVRKLVALKKWDELMNYDQLNKELRVGRVFDGWKEGLINFPPTYKYEINSDRYVGECPKEGEKMRAPAWCDRILWLGKGIKQLEYGRSEIRISDHRPVSSMFLVEVEVFDQRKLKIALNFTNTAAVHPAIFTDEDGDILSSY* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0182 618 SMART i5p_5 287 586 IPR000300 GO:0016791|GO:0046856
Lja2g0182 618 MobiDBLite consensus disorder prediction 174 201 - -
Lja2g0182 618 MobiDBLite consensus disorder prediction 178 194 - -
Lja2g0182 618 Gene3D Endonuclease/exonuclease/phosphatase 85 189 IPR036691 -
Lja2g0182 618 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 7 610 IPR045849 GO:0004445|GO:0046855
Lja2g0182 618 SUPERFAMILY DNase I-like 96 591 IPR036691 -
Lja2g0182 618 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 2 7 610 - -
Lja2g0182 618 MobiDBLite consensus disorder prediction 32 52 - -
Lja2g0182 618 Gene3D Endonuclease/exonuclease/phosphatase 327 604 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0182 Lja-Chr2 1575809 1580052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0182 343 551 Acyl Lipid Metabolism Gene Families AT1G05630 34.322 5.74e-36 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0182 K24221 - ccaj:109800886 956.822
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0182 2 1575809 1580052 Lja4g2658 4 36083131 36089693 PCT