Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2654 ATGGAGATGGCAGAGTTACCAGGACATTTTCGTTTCTGCTTGCACACTGGGAAACTTGTCCTTTTGGCAATTTTGGTCTCTGCAGGAGTCGTCCTGCAGATTTTGGCATGTGCCTTGTATGATAATTGGTGGCCAATGCTAACTGCAATAACATATGTGCTTCTTCCAATGCCTTTGTTGTTCTTTGCTGCATCAGAACGTTCTTCTTTATTTTCTGAATCAGATAGCAGCTGGGTGAATGCAACCAAGTTCTTGGCAGGGGCGTCAGCTGTTGGAAGCATTGCAATTCCAGCCATATTAAAGCATTCTGGTGTTATTGGTTGGGGAGCTCTTGCAATGGATGTCTCTTCCTTCTTTGTCTTTGTATTTGCCATCATGTGCTACATTCGGATGAGTGGTGAATATGATTACCGTATTATTTGA 423 0.4303 MEMAELPGHFRFCLHTGKLVLLAILVSAGVVLQILACALYDNWWPMLTAITYVLLPMPLLFFAASERSSLFSESDSSWVNATKFLAGASAVGSIAIPAILKHSGVIGWGALAMDVSSFFVFVFAIMCYIRMSGEYDYRII* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2654 140 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 55 HOMOLOG 3 136 - -
Lja4g2654 140 Pfam Vacuolar protein sorting 55 19 133 IPR007262 -
Lja4g2654 140 PANTHER LEPTIN RECEPTOR-RELATED 3 136 IPR007262 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2654 Lja-Chr4 35942945 35944612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2654 3 136 EF-hand Containing Proteins AT1G32410 66.418 2.44e-64 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2654 - - gmx:100775400 227.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0177 2 1517600 1519848 Lja4g2654 4 35942945 35944612 PCT