Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0177 ATGGCAGAATTACCAGGATATCTACGTTCCTGTTTGAACACAGGGAAACTTGCATTTTTGGCAATTTTAGTCTCTGGAGGAATTGTCTTGCAGATTTTGGCATGTGCCCTGTATAATAATTGGTGGCCGATGCTAAGTGCTATAACTTATGTGCTTCTTCCAATGCCTTTGTTGTTCTTTGCGGGGTCTGATGGCGATTCTATATTTTCAGAATCTGATAACAGCTGGGTGAATTTTACCAAGTTCTTGACCGGATCCTCGCTTGTCGGAGGCATTGCCATTCCGAGCATATTAATCCATGCTGGGGTTATCGGTTGGGGAGCCTTTGCAATGGAACTTTCTTCCTTCTTTGTGTTTATATTAGCTGTACTGTGTTTCCTGGGGATGAGCGGTGAAGATGATTACTACAGTATGATATGA 420 0.4262 MAELPGYLRSCLNTGKLAFLAILVSGGIVLQILACALYNNWWPMLSAITYVLLPMPLLFFAGSDGDSIFSESDNSWVNFTKFLTGSSLVGGIAIPSILIHAGVIGWGAFAMELSSFFVFILAVLCFLGMSGEDDYYSMI* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0177 139 Pfam Vacuolar protein sorting 55 17 133 IPR007262 -
Lja2g0177 139 PANTHER LEPTIN RECEPTOR-RELATED 1 136 IPR007262 -
Lja2g0177 139 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 55 HOMOLOG 1 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0177 Lja-Chr2 1517600 1519848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0177 1 139 EF-hand Containing Proteins AT1G32410 69.286 1.41e-67 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0177 - - gmx:100500037 242.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0177 2 1517600 1519848 Lja4g2654 4 35942945 35944612 PCT