Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2547 ATGGCCCATCCCCTGTTTTTTCTCATACTCATCACACTCTACATTTCACATCCCTCATCATCATCACAAATGCTCCTATTACCTCTCACACACTCCCTCTCCCAATCCCAATTCAACACCACCCACCACCTCCTCAAATCCACCACCACCCGCTCCGCCGCTCGCTTCCACTTCCACCACCACAAACAACGCCAACACCAACTCTCACTCTCACTCTCACCAGGATCAGACTACACACTCTCCTTCAACTTCGGCCACCACTCCCTAGTCCCTACAACCCATCACACTCTACATGGACACCGGCAGCGACCTCGCAAACCCAACCCCTCTTCCTCTTCTCCCCCATCCAACATCTCCCAAAGCGCCGCCGTTTCCTGCAACTCCCCTGCTTGCTCCGCCGCACACAGCACCACCATCCCTTCCTCCTCCGACCTCTGCGCAATCGCTCACTGCCCCCTCGACTCCATTGAAACCTCCGATTGCGCCAAATTCTCTTGCCCGCCGTTTTACTACGCCTACGACGATGGAAGCTTCATCGCTCGTCTCTACACAGACACACTCTCCCTCTCTTCTCTACTTCTTAAGAACTTCACCTTTGGCTGTGCCCACACCGCCCTGGCCGAACCCACCGGCGTCGCCGGCTTCGGTCGCGGCCTGCTCTCCCTCCCTGCTCAGCTCGCTACCCTTTCCCCCCATCTTGGGAACCGGTTCTCTTACTGTCTTGTTGCTCACTCGTTCCGCCCGGAGCGAGTCCGGCGACCAAGTCCGCTCATCCTCGGCTGCTACGATGAAGACGACAGGGCTGGTGGTGGTGGCGAAGTGGCGGCGTTTGTTTACACGCCGATGCTTGAGAACCCGAAGCAGCCCTATTTCTACTGCGTCGGGCTCACCGGAATCTCCGTCGAAAAAACCATCATTCCTGCACCGAAGATGCTGCGGAGGGTTAACCGGAGGGGTGACGGCGGGATAGTTGTGGATTCCGGCACAACGTTCACGATGCTGCCGGCGGGGTTTTATAACTCGGTGGTGGCCGAGTTCGACCACCGTGTCGGGCGAGTCAACACTCGCGCGCGGGGGGTTGAGGAGAGATCGGGGCTCGCGCCGTGCTATTACTTCGATGCGGCGGCAGAGGTTTGGGTTCCGGCGATGACGCTGCATTTTGCGGAGGGGAATTCGAGTGTGGTGCTGCCTAGGAAGAATTATTTCTACGAGTTTTTTGACGGTAGCGATGGGGCGAAGAGGAAGCGGAAGGTGGGGTGTTTGATGCTGATGAACGGTGGAGATGAGGTTAAATTTGACGGTGGGCCCGGGGCTGTACTTGGGAATTATCAACAACAGGGATTTGAAATTGTGTATGACCTGGAGAAGAAGCGCGTGGGGTTTGCACGGAGGAAGTGCGCGTCGCTTTGGGATAGACTGAACCGTGAGAAGAACTAG 1437 0.5692 MAHPLFFLILITLYISHPSSSSQMLLLPLTHSLSQSQFNTTHHLLKSTTTRSAARFHFHHHKQRQHQLSLSLSPGSDYTLSFNFGHHSLVPTTHHTLHGHRQRPRKPNPSSSSPPSNISQSAAVSCNSPACSAAHSTTIPSSSDLCAIAHCPLDSIETSDCAKFSCPPFYYAYDDGSFIARLYTDTLSLSSLLLKNFTFGCAHTALAEPTGVAGFGRGLLSLPAQLATLSPHLGNRFSYCLVAHSFRPERVRRPSPLILGCYDEDDRAGGGGEVAAFVYTPMLENPKQPYFYCVGLTGISVEKTIIPAPKMLRRVNRRGDGGIVVDSGTTFTMLPAGFYNSVVAEFDHRVGRVNTRARGVEERSGLAPCYYFDAAAEVWVPAMTLHFAEGNSSVVLPRKNYFYEFFDGSDGAKRKRKVGCLMLMNGGDEVKFDGGPGAVLGNYQQQGFEIVYDLEKKRVGFARRKCASLWDRLNREKN* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2547 478 PANTHER OS07G0603500 PROTEIN-RELATED 109 471 - -
Lja4g2547 478 PANTHER BNAA01G17170D PROTEIN 1 86 - -
Lja4g2547 478 ProSiteProfiles Peptidase family A1 domain profile. 66 462 IPR033121 -
Lja4g2547 478 Pfam Xylanase inhibitor C-terminal 292 462 IPR032799 -
Lja4g2547 478 Gene3D Acid Proteases 272 470 IPR021109 -
Lja4g2547 478 SUPERFAMILY Acid proteases 74 471 IPR021109 -
Lja4g2547 478 Pfam Xylanase inhibitor N-terminal 105 247 IPR032861 -
Lja4g2547 478 MobiDBLite consensus disorder prediction 93 121 - -
Lja4g2547 478 PANTHER OS07G0603500 PROTEIN-RELATED 1 86 - -
Lja4g2547 478 PANTHER BNAA01G17170D PROTEIN 109 471 - -
Lja4g2547 478 Gene3D Acid Proteases 101 260 IPR021109 -
Lja4g2547 478 CDD pepsin_A_like_plant 166 466 IPR034161 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2547 Lja-Chr4 32514900 32516379 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2547 - - gmx:100805699 629.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2547 4 32514900 32516379 Lja4g2547 4 32514900 32516379 ECH
Lja2g0099 2 769476 771430 Lja4g2547 4 32514900 32516379 PCT