Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2519 ATGAAGAAAAACCAAGAACAAGAACCATTGCTTCTTCCAACTTCTCACACCCCCCTCCTCCACCACCAACAGCACCACCACCCTCGCCGCCACCGCAACGACATCCTCCTCATTGTCTTCGGCTCACTCCTCCTCGCTTCCCTCGTCACCTTCGCCGGCCACAGTGCCTCCAAATCACGCGCTCCTCACCACCATGCTGGTGTGGCGTCATCGGAATCAACAGTGCCTTCCCGCGCCGTTTCGCGCGGTGTTTCAGAAGGCGTGTCGGAGAAGACGAACAGGTTGTTCGCTGCCGGCGGCGAAGGTGGAGGAGCGGAGTATTTTCCGTGGAACAACAGCATGCTGTCGTGGCAGAGAACTACGTTCCATTTTCAACCAGAGAAGAATTGGATGAACGATCCTAATGGTCCTATGTACTACAAGGGATGGTACCATTTCTTCTACCAGTACAACCCAAACGGTGCCGTATGGGGCGACATAGTTTGGGGACATGCAGTATCAAGAGACATGATCCACTGGCAGCACCTTCCCCTAGCAATGGTAGCAGACCAATGGTATGACAAAATGGGAGTGTGGACCGGTTCAGCCACCATCTTACCAGACGGTCAGATCATCATGCTCTACACAGGTTCAACCAATGAGTCAGTGCAGGTTCAGAATCTCGCATACCCTGCTGACCCCTCAGACCCTCTCCTTGTGGACTGGATCAAATACCCTGCAAACCCGGTTCTGCTCCCTCCACCAGGGATTGGTTTCAAGGACTTCAGGGACCCAACCACAGCTTGGTTCACCTCTGAAGGGAAATGGCGTATCACCATCGGGTCCAAGCTTAACAAAACCGGCATTGCCTTGGTTTATGACACTGTGGACTTCAAAACCTATGAGCTTAAGAAGGATTTGCTCAATGCTGTCCCTGGCACAGGCATGTGGGAGTGTGTAGATTTCTTCCCTGTGTCCAAGAAGGGTGAGAATGGATTGGATACTTCTATTAATGGGGGTGATGTGAAGCATGTTATGAAGGTGAGTTTGGATGATGATAGACATGATTACTATTCCATTGGGACTTATGATGAGAAGAAGGTTAAGTTCACAGCTGATGATTTGAAGAATGATGTTGGTATTGGATTGAGGTATGACTATGGTATATTCTATGCTTCCAAGACATTTTTTGATCAGAGTAAGGATAGGAGAGTGTTGTGGGGTTGGATTGGTGAGTCTGACAGCGAATATGCTGATGTAGCCAAAGGTTGGGCATCAGTTCAGGGTATTCCAAGAACAGTGACACTTGATAAGAAGACTACAACCCACTTACTTCAGTGGCCTATTGCAGAGGTGGATAGTTTAAGATTAAGAAGCGACGAATTCAAAAATTTGAAGGCAGCGCCAGGGTCAGTGGTGTCACTAGACATTGAATCAGCCACACAGTTGGACATTGTTGCTGAGTTTGAGATAGACAAGGAAGCACTAGATAAAGCACCACAATCCAATGTTGAGTACACTTGCAGCACAAGTGGTGGAGCTTCCAAACGAGGTGCCTTGGGACCTTTTGGTTTCCTAGTTTTGGCAGATAATGGTCTTTCTGAATACACTCCTGTATATTTCTATGTCGTCAAAGGAAGCGACGGAAAGCTTAAGACATCATTCTGCTCTGATCAATCAAGGTCTTCTGTGGCAAATGATGTTCACAAGCAAATCTATGGGAGCGCTGTTCCGGTACTTGAAGGCGAAAAGTTGTCCTTGAGGGTACTGGTGGATCATTCTATAGTTGAAAGCTTTGTTCAAGGTGGAAGGACCACTGTGACATCCCGGGTTTACCCAACAAGGGCAATCTATGGGGCTGCTCGGTTGTTCTTGTTCAACAATGCTACTGAGGCCACTGTGACAGCCTCATTCAAGATTTGGCAGATGAATTCTGCATTTATACGCCCATACCAACCAGATCAGAAGAGCTAA 1953 0.4798 MKKNQEQEPLLLPTSHTPLLHHQQHHHPRRHRNDILLIVFGSLLLASLVTFAGHSASKSRAPHHHAGVASSESTVPSRAVSRGVSEGVSEKTNRLFAAGGEGGGAEYFPWNNSMLSWQRTTFHFQPEKNWMNDPNGPMYYKGWYHFFYQYNPNGAVWGDIVWGHAVSRDMIHWQHLPLAMVADQWYDKMGVWTGSATILPDGQIIMLYTGSTNESVQVQNLAYPADPSDPLLVDWIKYPANPVLLPPPGIGFKDFRDPTTAWFTSEGKWRITIGSKLNKTGIALVYDTVDFKTYELKKDLLNAVPGTGMWECVDFFPVSKKGENGLDTSINGGDVKHVMKVSLDDDRHDYYSIGTYDEKKVKFTADDLKNDVGIGLRYDYGIFYASKTFFDQSKDRRVLWGWIGESDSEYADVAKGWASVQGIPRTVTLDKKTTTHLLQWPIAEVDSLRLRSDEFKNLKAAPGSVVSLDIESATQLDIVAEFEIDKEALDKAPQSNVEYTCSTSGGASKRGALGPFGFLVLADNGLSEYTPVYFYVVKGSDGKLKTSFCSDQSRSSVANDVHKQIYGSAVPVLEGEKLSLRVLVDHSIVESFVQGGRTTVTSRVYPTRAIYGAARLFLFNNATEATVTASFKIWQMNSAFIRPYQPDQKS* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2519 650 CDD GH32_Fruct1-like 129 429 - -
Lja4g2519 650 Pfam Glycosyl hydrolases family 32 N-terminal domain 123 441 IPR013148 -
Lja4g2519 650 MobiDBLite consensus disorder prediction 59 84 - -
Lja4g2519 650 ProSitePatterns Glycosyl hydrolases family 32 active site. 123 136 IPR018053 GO:0004553|GO:0005975
Lja4g2519 650 Gene3D - 453 636 - -
Lja4g2519 650 SUPERFAMILY Arabinanase/levansucrase/invertase 116 442 IPR023296 -
Lja4g2519 650 Pfam Glycosyl hydrolases family 32 C terminal 444 635 IPR013189 -
Lja4g2519 650 Pfam Beta-fructofuranosidase, N-terminal domain 17 115 IPR021792 GO:0004564
Lja4g2519 650 SMART glyco_32 123 596 IPR001362 GO:0004553|GO:0005975
Lja4g2519 650 PANTHER ACID BETA-FRUCTOFURANOSIDASE 4, VACUOLAR 22 645 - -
Lja4g2519 650 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 22 645 - -
Lja4g2519 650 MobiDBLite consensus disorder prediction 1 27 - -
Lja4g2519 650 Gene3D Glycosyl hydrolase domain; family 43 127 452 IPR023296 -
Lja4g2519 650 SUPERFAMILY Concanavalin A-like lectins/glucanases 441 640 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2519 Lja-Chr4 31197237 31201661 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2519 5 644 Glycoside Hydrolase AT1G12240 65.184 0.0 852
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2519 K01193 - gmx:100788844 1050.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2519 4 31197237 31201661 Lja4g2519 4 31197237 31201661 ECH
Lja2g0083 2 624589 627909 Lja4g2519 4 31197237 31201661 PCT