Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2383 ATGGCACCGACTGTACTTGTAGAATTAGCTGGACAAAAGGAATCAAAGAAGTGCACTCTTACACAGGTGATGGGCAAGTCGCGAAAGTATTTGAAAAGTTATGCTACTGGTTTTGTTCCTGATTTTCGCCATGCTGTTGCTGAGACTTTGGGGGGTGAATCAGAAGGGCTTGAACTGAGAGTAGTGGAAGGTTTGTCGTGTGCGCCTAAGATGAAATATCCCAGTTTGGATGTTGATGGCTGTGATAGTTTTGGTGTACCGTTTCAACTATTGGGTTTATCGAAGATGTCGCGTTCTGAGAGAAAGAACTTGAAACGGAGGTTGAAATGGGAACTTGACGAAGTAAGGAAACTTCAGAAGAGAGCCCCAAACATGAATTCAAACATTACTGCTACTGCTGCATTGCCTTCCTATGGTGACATACGGAGCTCCAGTGAGGGACAAAAGAGGCCTCTACTGGAAAGGCAGCATAGCTCGCTGGAAGCAACAACACCACACAGTAAGAAACATCTCCCACCAAAGCCTAATAGTTCTAAAACAAAGAGAAGTGTTTCTGGGCGAAATGCTGAATCCGATAAACCTTCTGCTCCAGTGACTCCTTCGTATGGTGCATTGATGAAACAGTGCGAGTCCGTACTTGGCCGTTTGCTGTCTCACAAATTTGGTCCGTTTTTTGACAAACCAGTTGATGTTGTAAAGTGGAATATCCCAGATTATTTCACTATCATCAAGCATCCGATGGATTTGGGTACTGTGAAGAGTAAACTGGGCTCTGGTAAATATTCAAGTCCTAAAGATTTTGCTGCAGATGTACGGCTGACTTTCTCAAATGCGATGACATACAATCCACCCGGCAATGATGTGCATATCATGGCAGACTTACTAAATAAATATTTTGAAACGAGATGGAAGCCTATAGAAAAGAAAATTCCTGCCATTGACAATGTGCCATCTGAGCCTTCGAAACCCACTACATGTGTTCAAACTGAAATTGCTGACCCTATTCCTCGGCTAAAAAAGCAGAAAATAACACCAAAGGACACAAAAGTCAAGCCAAAGTGTATTGATAGAATCATGACTGATGAGGAGAAGCAGAAGATGAGTTTGGAGTTGGAGGCTTTACTTGCAGAAGATGAGTCGCCTGAAACCATCATTGATTTCTTAAAGGAGCAAAGTCATAATTCTGGGCAAACAAATGATGATGAAATTGAGATTGATATTGATGCTCTTGGGAATGATACATTATTTAAATTGAGGAAGCTTCTTGATGATTATGTGATGGAGAAGCAAAAAATCCATGCAGCAACTGAACCATGTGAAATCAAGCTTGCAAATGAATCCGGATTTCACAATTTACCAGTGCAACAATGTAAAGGCAATGAACCAGTTGAAGAGGACATAGATATTGTTGGGGGGAATGATCCTCCTCTTTCAAGTTACCCTCCAGTGGAGATTGATGTCACCAACAAAGACAGTAAATCCAGTAGTTCTAGCAGCTCCAGCAGCGATTCTGGCTCTTCATCCAGTGATTCAGGTAGTTCGGCAGATAGTGAGCCAGACATTCCTAAAGCATCAGCGCCTTTTACTCCTAGCAAGGAAAAACTAGGACCGGGCTTGTCTTTAGATCAAAAGAATGGGGATCTAGGTAATTCAGAAACCGGAATAGATTCAATGAATGCAGTTGGCCATGTTGAGCCAAGTTCCCTGATAAATCCAGTTATTAACGAACCAGAAAGCCATCAAGAGGGGGAGAGTGCTCCATCTAAGAGGCAAGTCTCTCCCGATAAGCTTTACCGTGCAGCATTATTAAGGAGCAGATTTGCTGACACTATACTTAAAGCTCAAGAAAAGGCACTTGAGAAGGGTGAGAAGCAGGACCCTGAAAAACTTAGGATGGAACGAGAAGAGCTCGAGAGACGGAAGAAGGAAGAGAAAGCGCGGTTGAAGGCTGAGGCAAAGGCTGCAGAAGAGGCTCAGAGGAAAGCTGAAGCAAAAGCTGCAGCTGAAGCTAAAAGGAGGAGAGAACTGGAGAGGGAAGAGGCTCGTCAGGCCTTGCAAAAGATGGAGAAGACTGTAGATATCAATGAGAGCAGTCAATTCTTGGAAGATCTAGAGATGCTGAGTGGTGTACAAGATGAACCTTTAATAAGTTTCGCTGAAGAGTCAAGCCCAGATCGTCCTCAAAATGGACTGGGTTCTTTCAAACGACAGGGTAGTTTTAATCCATTAGAACAGCTAGGGTTGTACATGAAGGTGGATGATGAGGATGAGGAAGAAGAACCTCCTAAGAATGAAGCAGGGCCAACAGATGACGTAGAAGAAGGAGAAATTGATTAA 2337 0.4318 MAPTVLVELAGQKESKKCTLTQVMGKSRKYLKSYATGFVPDFRHAVAETLGGESEGLELRVVEGLSCAPKMKYPSLDVDGCDSFGVPFQLLGLSKMSRSERKNLKRRLKWELDEVRKLQKRAPNMNSNITATAALPSYGDIRSSSEGQKRPLLERQHSSLEATTPHSKKHLPPKPNSSKTKRSVSGRNAESDKPSAPVTPSYGALMKQCESVLGRLLSHKFGPFFDKPVDVVKWNIPDYFTIIKHPMDLGTVKSKLGSGKYSSPKDFAADVRLTFSNAMTYNPPGNDVHIMADLLNKYFETRWKPIEKKIPAIDNVPSEPSKPTTCVQTEIADPIPRLKKQKITPKDTKVKPKCIDRIMTDEEKQKMSLELEALLAEDESPETIIDFLKEQSHNSGQTNDDEIEIDIDALGNDTLFKLRKLLDDYVMEKQKIHAATEPCEIKLANESGFHNLPVQQCKGNEPVEEDIDIVGGNDPPLSSYPPVEIDVTNKDSKSSSSSSSSSDSGSSSSDSGSSADSEPDIPKASAPFTPSKEKLGPGLSLDQKNGDLGNSETGIDSMNAVGHVEPSSLINPVINEPESHQEGESAPSKRQVSPDKLYRAALLRSRFADTILKAQEKALEKGEKQDPEKLRMEREELERRKKEEKARLKAEAKAAEEAQRKAEAKAAAEAKRRRELEREEARQALQKMEKTVDINESSQFLEDLEMLSGVQDEPLISFAEESSPDRPQNGLGSFKRQGSFNPLEQLGLYMKVDDEDEEEEPPKNEAGPTDDVEEGEID* 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2383 778 Coils Coil 627 698 - -
Lja4g2383 778 MobiDBLite consensus disorder prediction 618 690 - -
Lja4g2383 778 Pfam Bromodomain 209 292 IPR001487 GO:0005515
Lja4g2383 778 Pfam Bromodomain extra-terminal - transcription regulation 359 423 IPR027353 -
Lja4g2383 778 Coils Coil 359 379 - -
Lja4g2383 778 MobiDBLite consensus disorder prediction 722 740 - -
Lja4g2383 778 MobiDBLite consensus disorder prediction 712 778 - -
Lja4g2383 778 MobiDBLite consensus disorder prediction 465 594 - -
Lja4g2383 778 MobiDBLite consensus disorder prediction 618 689 - -
Lja4g2383 778 PANTHER TRANSCRIPTION FACTOR GTE10 67 769 - -
Lja4g2383 778 CDD Bromo_plant1 205 303 IPR037377 -
Lja4g2383 778 PANTHER TRANSCRIPTION FACTOR GTE8 67 769 - -
Lja4g2383 778 SMART bromo_6 198 308 IPR001487 GO:0005515
Lja4g2383 778 ProSiteProfiles NET domain profile. 349 433 IPR027353 -
Lja4g2383 778 MobiDBLite consensus disorder prediction 488 518 - -
Lja4g2383 778 Gene3D - 187 314 IPR036427 GO:0005515
Lja4g2383 778 ProSiteProfiles Bromodomain profile. 217 289 IPR001487 GO:0005515
Lja4g2383 778 PRINTS Bromodomain signature 252 270 IPR001487 GO:0005515
Lja4g2383 778 PRINTS Bromodomain signature 270 289 IPR001487 GO:0005515
Lja4g2383 778 PRINTS Bromodomain signature 236 252 IPR001487 GO:0005515
Lja4g2383 778 MobiDBLite consensus disorder prediction 147 168 - -
Lja4g2383 778 MobiDBLite consensus disorder prediction 123 144 - -
Lja4g2383 778 MobiDBLite consensus disorder prediction 123 201 - -
Lja4g2383 778 Gene3D - 355 432 IPR038336 -
Lja4g2383 778 MobiDBLite consensus disorder prediction 177 195 - -
Lja4g2383 778 SUPERFAMILY Bromodomain 200 311 IPR036427 GO:0005515
Lja4g2383 778 Coils Coil 101 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2383 Lja-Chr4 26663766 26671666 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2383 - - gmx:100782458 819.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5257 1 79441504 79447437 Lja4g2383 4 26663766 26671666 ECH
Lja4g2383 4 26663766 26671666 Lja4g2383 4 26663766 26671666 ECH