Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2296 ATGCGATTTACAATTAAAACCCCTTCCCCGACTAAAGCCATAATCCCAATTTTGACTACCTCGGTAATGAGCGCTATTGAAATCGTTAATTTATCTAGTGACGATGAAGGGCCCGAAGCTGCAGAAAATATAAGCTCTAGTGGTCCATGTACATGTCATAGTCATTCTGGTGACACTGGCCTTTTTTACGCGACACTGCCAAATTGTGCACCACCCCCTTGTAGGCAGTTTTGGAAAGCTGGAAATTATGACAACGGACTTGGTTTGCAAGTCAGCATCCAAAATGCAGGAAACTATCTGCATGTCCACCCTATGTTCCTTCACTCAAACGCAACTTCACATAAATGGGCATTTGGTGCGGTGGCTGAGCTTCTTGATAATGCAGTTGATGAGATCCAAAATGAGGCTACTTTTGTTGTTGTGGATAAAATTTTAAATCCGAGGGATGGAAGTCCAGCATTGCTGATTCAAGATGATGGTGGTGGAATGGGTCCAGAAGCAATGCGTCATTGCTTGAGTTTCGGGTATTCAGATAAAACAAAATTGGCAATTGGACAATATGGAAATGGCTTCAAGACTGGTAGTATGAGACTCGGTGCCGATGTCATTGTCTTCAGTTGCCACCTGAATGATATGGGGTGGACTCAAAGCGTTGGACTTTTGTCTTATACAATGTTGATGCAATCTCGGGTTGACAGAATTGTAGTGCCCATGGTGAATTATAAATATAATCCATCAGCTGGGCACATGGAAGTCATAAATGGCCTAGAGCATGGAACCACTAATATGTCCTTGCTGCTGCAGTGGTCTCCATATTCATCAGAAGCAGAACTTCTGAAACAATTTGTTAACATTGGACATCATGGTACGAAAATTATTATCTTCAATTTATGGTGCAACCATGATGGGGATTTGGAACTAGACTTTGATACTGATCCCGAGGATATTCATATTGCTGGGCACTTCAAGAAAACTGATACAACTTCTGCGAGGAAGAAGATAGTAAATGAGCAACACATTGCTAACCGGTTTAAATATTCTTTACGTGTTTACTTGTCTATATTGTACTTGCGGATACCAGAACATTTTAGGATTATTTTGCGAGGGCAAGTTGTGAAGCTACATAATATTGCAGACGATCTTAAACATATTCAGTATATTTTGTATACACCACAAAGTGGTGGTTCAAAAAAGGCAACTTTTGTGACAACAATTGGATTTCTTAAGGAAGCTCCGGAAGTTAACATCCATGGCTTCAATATATATCACAAAAATCGGCTGATACTGCCATTTTGGCCGGCTGTGAGCTATGGAAAAAATAGGGGTAGAGGAGTTGTGGGTGTCTTGCAAGCAGATTATATTGAGCCGACTCATAATAAGCAAGATTTTGAGAGATCTTCTCTGTCTCAGAAGCTTGAAATACGCTTAAAGGAGATGGCACTGGAATACTGGGATTATCACTGTCATCTAATTGGATATCCGGAAGTCAAGCATAAAGCTCCTGTTAGCCAATGCTTTTCATCAATGCAGGAACCACTTGCTATCGTAATATCAAATGCATCAAACAACTGTTCCAACTCACAAAGCAGATATGAGCAAGCACCTCTTGCCAAGAGGAAAACACGTGGGTTCATAGACCCTCACAAGGCGAAAAGGCAATCAGCGGAACTGAATGTAATAGGTGTTAGTTGCAGTCAGAATGTTCAGACCATGGCATCTCCTGCAGACCAGGTGGTGGACCAAGAAGCTATAAACATAATAGAAGCAAACAAGAATCTCATTGCAGAATGTTTGGAACATGAAAAGACCGAGGAAGAACTCAATCTAAAGGTGGCACAGCTCAGAAGTAAAATTGAAGAAGCTCAGCACGAGTATAATAGACTTTTGGCCGAAGCACAGCCCCTAAAGGAAGAGTGA 1917 0.4131 MRFTIKTPSPTKAIIPILTTSVMSAIEIVNLSSDDEGPEAAENISSSGPCTCHSHSGDTGLFYATLPNCAPPPCRQFWKAGNYDNGLGLQVSIQNAGNYLHVHPMFLHSNATSHKWAFGAVAELLDNAVDEIQNEATFVVVDKILNPRDGSPALLIQDDGGGMGPEAMRHCLSFGYSDKTKLAIGQYGNGFKTGSMRLGADVIVFSCHLNDMGWTQSVGLLSYTMLMQSRVDRIVVPMVNYKYNPSAGHMEVINGLEHGTTNMSLLLQWSPYSSEAELLKQFVNIGHHGTKIIIFNLWCNHDGDLELDFDTDPEDIHIAGHFKKTDTTSARKKIVNEQHIANRFKYSLRVYLSILYLRIPEHFRIILRGQVVKLHNIADDLKHIQYILYTPQSGGSKKATFVTTIGFLKEAPEVNIHGFNIYHKNRLILPFWPAVSYGKNRGRGVVGVLQADYIEPTHNKQDFERSSLSQKLEIRLKEMALEYWDYHCHLIGYPEVKHKAPVSQCFSSMQEPLAIVISNASNNCSNSQSRYEQAPLAKRKTRGFIDPHKAKRQSAELNVIGVSCSQNVQTMASPADQVVDQEAINIIEANKNLIAECLEHEKTEEELNLKVAQLRSKIEEAQHEYNRLLAEAQPLKEE* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2296 638 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 23 634 IPR045261 GO:0016887
Lja4g2296 638 PANTHER HISTIDINE KINASE-, DNA GYRASE B-, AND HSP90-LIKE ATPASE FAMILY PROTEIN 23 634 - -
Lja4g2296 638 Gene3D - 105 295 IPR036890 -
Lja4g2296 638 Pfam Morc6 ribosomal protein S5 domain 2-like 346 484 IPR041006 -
Lja4g2296 638 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 119 213 - -
Lja4g2296 638 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 117 232 IPR036890 -
Lja4g2296 638 Coils Coil 590 638 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2296 Lja-Chr4 25328629 25338808 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2296 - - lja:Lj4g3v1474120.3 877.856
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5680 1 100330298 100343322 Lja4g2296 4 25328629 25338808 ECH
Lja4g2296 4 25328629 25338808 Lja4g2296 4 25328629 25338808 ECH