Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2273 ATGGATCCTCACGCCGCCGCCGCCGCCGCTGCCAATGTCGCCGATGCTGTTGCCGCCTATGCCGCCGCCGATCCAGCACATGCCGATGCTGCCTATGCCGCCGCCGTCAATGCCGCCAATGATTCCGATTCCGATCCCGAGAGCATCGTTACCGAGGGAGACTACCTTGTCCGGGAGAATGTCCGGAGCGCGGAGTCCATCCGTAGCAGATTCACGGCGGGACTGGGGGCTATGGCACCGTGTATCCAGGTGGTTCAAATTCGGAGAAACACTTTTCCGACGGTGATGACGCAGGCGCGTATTGACGCGTTCGAGATCTACGCGCGTGCGACGGCGCGTGCGCGTGACGGCGATGCGAACGTGGAGCATGCGTGGTTCGGTGCTACCAACATGGATGAGATCCTGGGCATCATTAAGCACGGTTTCGGGCAAGATCAACTCCATGGACATGGCCTGCGTCTCTCTCCAGAGGATTGTCCTATACTATGTATGGCAAGGACTGCTCCTGACAATGGTGGCTTGAAGCACTTGTTGTTGTGCCGTGTTATCTTGGGGAGGATGGCGGTGCTGGCTCCCGGTTCTGAATGCGAACCGATTTCTCAAGAATATGATTCTGCGGTGCACAATGTTTCATCTTTTAAGGAGTACTTCATTTGGAGTAACCAAATGAACACACATGTCTTGCCTGAATATGTTTTGAGTTACAAGGATCTCGTCCCCACCACAGGGCTTGGGAATGTGGCTAAGAGACCAATATCCCCACCGATACCGATTGGGACGCTTATCACAGCGCTATCTAGGTTGTTGCCTTTGAATGAAATGGCCTTCATTTCAAGGTCGTACCAAGAATTCAATGAAAACATTATATCACGAGAGGTTTTGGTGCAAAGGCTGAGAGTGATTGCTGGGGAACAAATGGTGACTAAGATCATTAGATCTTTTCAAGCATTCGTGGAGTTTCGTGGTTTCTTTACCCAGTACATTCGCCTATTGGAATTGGAGGAATTGATGGAAGATTCAAAAATTCCCAGTTGGTGTTCAGATGAAGGTTTTTCATCTATTGGTGATGGCAAAAGCTCATTGGTTGCTAGTATTCTTGAATCACCGACACGAACCCTATCAGAGTCCATTGGTGAGGATGAAGCGGGTGAAGGAGTTGTTGTGAATAGCATGGATGATGGGGCTAATATCGTGTGGGATTGTATCAACGACACTGAGTTCATGAAATATCATTTTCTTAATCGGCAGGTGGCATGTGTCTATATTTGTAGATGCTCACAATCACGCAATGTTGGAGGGAAAGCAATCCTCGATGTTACCAGCACATCGGAAGTTGGAAGAAGGCGATATAGTGGGAATCAACAGTATGCAAAAAGCCGGTATTAG 1386 0.4964 MDPHAAAAAAANVADAVAAYAAADPAHADAAYAAAVNAANDSDSDPESIVTEGDYLVRENVRSAESIRSRFTAGLGAMAPCIQVVQIRRNTFPTVMTQARIDAFEIYARATARARDGDANVEHAWFGATNMDEILGIIKHGFGQDQLHGHGLRLSPEDCPILCMARTAPDNGGLKHLLLCRVILGRMAVLAPGSECEPISQEYDSAVHNVSSFKEYFIWSNQMNTHVLPEYVLSYKDLVPTTGLGNVAKRPISPPIPIGTLITALSRLLPLNEMAFISRSYQEFNENIISREVLVQRLRVIAGEQMVTKIIRSFQAFVEFRGFFTQYIRLLELEELMEDSKIPSWCSDEGFSSIGDGKSSLVASILESPTRTLSESIGEDEAGEGVVVNSMDDGANIVWDCINDTEFMKYHFLNRQVACVYICRCSQSRNVGGKAILDVTSTSEVGRRRYSGNQQYAKSRY* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2273 461 Gene3D - 56 237 - -
Lja4g2273 461 Pfam RCD1-SRO-TAF4 (RST) plant domain 250 315 IPR022003 -
Lja4g2273 461 ProSiteProfiles PARP catalytic domain profile. 40 256 IPR012317 GO:0003950
Lja4g2273 461 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 42 315 IPR044964 -
Lja4g2273 461 SUPERFAMILY ADP-ribosylation 113 240 - -
Lja4g2273 461 ProSiteProfiles RST domain profile. 249 320 IPR022003 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2273 Lja-Chr4 25029313 25034978 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2273 - - gmx:100813999 223.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2273 4 25029313 25034978 Lja1g5660 1 99712273 99715657 PCT