Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2237 ATGGCAGGGGGCGGTGGCGGAGGAGCTCCGGCGCCGAAGGCTGATGAGCCACAGCCACATCCACCGAAGGATCAGCTACCCAATGTTTCTTACTGCATTACAAGCCCTCCTCCATGGCCTGAGGCCATACTTCTTGGTTTTCAACATTATCTTGTGATGCTCGGCACAACTGTGCTAATTCCAACTGCTCTTGTTCCCCAGATGGGAGGTGGCAATGATGAGAAGGCCAAAGTTATCCAGACACTACTATTTGTGGCTGGAATCAACACATTACTGCAATCTATGTTTGGAACTCGTTTGCCGGCTGTAATTGGCGGGTCATATACCTATGTTCCAACAACAATCTCAATTATTCTTGCTGGTCGGTTCAGTGATGAGCCAGATCCTATAGAGAAATTCAAGAGGATAATGCGGGCAACCCAAGGTGCTCTTATTGTTGCTTCAACCCTTCAAATAGTACTGGGCTTTAGTGGTCTGTGGCGCAATGTTGCAAGGTTCTTAAGTCCACTTTCAGTGGTTCCTTTGGTATCTCTTGTTGGTTTTGGACTGTACGAGTTAGGCTTTCCTGGGGTTGCTAAATGTGTAGAGATAGGACTGCCGGAGCTTATAATTCTAGTATTTGTTTCACAGTACGTACCCCATGCACTACATTCAGGAAAGCATGTCTTTGACCGTTTTGCTGTTCTAATTACAATTGCGATTGTCTGGTTATATGCTTATATCCTCACTGTTGGGGGTGCCTATAACCATGCTGCACGTAAAACACAGACAACCTGCCGCACTGATCGTGCTGGCTTAATCGATGCTGCCCCATGGATACGAGTTCCGTATCCATTCCAATGGGGAGCACCTTCATTTGATGCAGGTGAGGCCTTTGCCATGATGATGGCATCCTTTGTTGCTCTTGTAGAGTCCAGTGGAGCTTTTACTGCTGTTTACCGATTTGCAAGTGCAACACCATTACCCCCATCTATTCTTAGTCGGGGTATTGGTTGGCAGGGAGTTGGCATACTGTTATCAGGATTGTTTGGAACCGGCAATGGATCCTCTGTATCTGTAGAGAATGCTGGTCTTTTGGCTTTGACTCGTGTTGGCAGTCGAAGAGTGGTGCAAATAGCTGCTGGGTTTATGATCTTCTTTTCAATTCTAGGGAAATTCGGAGCAGTTTTTGCCTCCATTCCACCTCCCATGATTGCTGCACTGTATTGCTTGTTTTTTGGTTATGTTGGAGCTGGAGGTCTAAGTTTTCTTCAATTCTGCAACCTCAATAGTTTCAGAACAAAGTTCGTTTTAGGTTTCTCTATCTTCCTGGGCTTGTCTATTCCACAGTACTTCAACGAGTACACAGCAATTAATGGTTATGGTCCAGTTCACACAGGAGCAAGATGGTTCAATGATATAGTCAATGTACCATTCCAATCAAAAGCATTTGTTGCTGGGGTTGTGGCGTATTTCTTGGATAACACACTGCATAAGAAGGAATCTGCTATTAGGAAAGACAGAGGAAAACATTGGTGGGACAAGTACCGGTCCTTCAAGACTGACACAAGAAGTGAGGAGTTCTATTCACTGCCTTTCAATCTGAACAAGTACTTCCCATCTGTGTAA 1608 0.4527 MAGGGGGGAPAPKADEPQPHPPKDQLPNVSYCITSPPPWPEAILLGFQHYLVMLGTTVLIPTALVPQMGGGNDEKAKVIQTLLFVAGINTLLQSMFGTRLPAVIGGSYTYVPTTISIILAGRFSDEPDPIEKFKRIMRATQGALIVASTLQIVLGFSGLWRNVARFLSPLSVVPLVSLVGFGLYELGFPGVAKCVEIGLPELIILVFVSQYVPHALHSGKHVFDRFAVLITIAIVWLYAYILTVGGAYNHAARKTQTTCRTDRAGLIDAAPWIRVPYPFQWGAPSFDAGEAFAMMMASFVALVESSGAFTAVYRFASATPLPPSILSRGIGWQGVGILLSGLFGTGNGSSVSVENAGLLALTRVGSRRVVQIAAGFMIFFSILGKFGAVFASIPPPMIAALYCLFFGYVGAGGLSFLQFCNLNSFRTKFVLGFSIFLGLSIPQYFNEYTAINGYGPVHTGARWFNDIVNVPFQSKAFVAGVVAYFLDNTLHKKESAIRKDRGKHWWDKYRSFKTDTRSEEFYSLPFNLNKYFPSV* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2237 535 MobiDBLite consensus disorder prediction 1 28 - -
Lja4g2237 535 Pfam Permease family 41 445 IPR006043 GO:0016020|GO:0022857|GO:0055085
Lja4g2237 535 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER-LIKE PROTEIN 6 535 - -
Lja4g2237 535 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 6 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2237 Lja-Chr4 24583379 24588872 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2237 11 535 Organic Solute Cotransporters AT5G49990 80.608 0.0 867
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2237 - - gmx:100791553 1007.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2237 4 24583379 24588872 Lja4g2237 4 24583379 24588872 ECH
Lja4g2237 4 24583379 24588872 Lja1g5634 1 98864765 98871140 PCT